ncchung / jackstrawLinks
Statistical Inference for Unsupervised Learning
☆16Updated 9 months ago
Alternatives and similar repositories for jackstraw
Users that are interested in jackstraw are comparing it to the libraries listed below
Sorting:
- post-clustering differential expression test☆36Updated 6 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆106Updated 2 years ago
- ☆16Updated 6 years ago
- R package for differential discovery analyses in high-dimensional cytometry data☆21Updated 8 months ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- Inference of switch-like differential expression along single-cell trajectories☆21Updated 7 years ago
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆36Updated 9 months ago
- Single-cell Hierarchical Poisson Factorization☆73Updated 3 years ago
- A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍☆76Updated 4 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 6 years ago
- Multi-omics studies are available here☆52Updated 3 years ago
- ☆71Updated 4 months ago
- ☆29Updated 2 years ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆12Updated 4 years ago
- ☆43Updated 4 years ago
- ☆48Updated 7 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆22Updated last year
- Single Cell Epigenome-based Inference of Activity☆19Updated 2 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆29Updated 8 months ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- ☆18Updated last year
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 3 weeks ago
- Code and manuscript files for Aaron and Karsten's deconvolution paper.☆16Updated 6 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- A statistical simulator for rational scRNA-seq experimental design☆12Updated 4 years ago
- consistent quantification of external RNA-seq data sets☆58Updated last year
- An analytics package for single cell data☆22Updated 3 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year