bvoightlab / ColocQuiaLLinks
Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
☆20Updated 3 months ago
Alternatives and similar repositories for ColocQuiaL
Users that are interested in ColocQuiaL are comparing it to the libraries listed below
Sorting:
- GENI plots to visualise results from genome-wide association studies☆30Updated last year
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- SCALLOP-INF analysis☆20Updated 3 weeks ago
- Primo☆16Updated 4 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated last month
- Fine-mapping with infinitesimal effects☆20Updated 5 months ago
- ☆23Updated 3 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆34Updated 5 years ago
- ☆12Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 2 years ago
- PredictDB Pipeline for GTEx v7 data☆16Updated 3 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- R package for processing of GWAS output☆16Updated last year
- Create Regional Association Plots☆12Updated 2 months ago
- ☆12Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆18Updated 8 months ago
- TWAS-pipeline☆24Updated 4 years ago
- Integration of TWAS and Colocalization Analysis☆17Updated last year
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆13Updated 6 years ago
- Manhattan++☆28Updated last year
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- ☆20Updated last year
- ☆11Updated 3 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆30Updated last week
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- A collection of various utilities for GWAS summary statistics☆32Updated last year
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated last year
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- Regional association plots☆26Updated last year
- ☆22Updated 2 months ago