Alternatives and similar repositories for ColocQuiaL

Users that are interested in ColocQuiaL are comparing it to the libraries listed below

• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆31Updated last year
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• kjgleason / Primo
  Primo
  ☆16Updated 4 years ago
• derekmichaelwright / gwaspr
  An R package for plotting GWAS results from the GAPIT package
  ☆14Updated 3 months ago
• bhattacharya-a-bt / isotwas
  ☆23Updated last week
• lcpilling / gwasRtools
  R package for processing of GWAS output
  ☆16Updated last year
• mglev1n / locusplotr
  Create Regional Association Plots
  ☆13Updated 4 months ago
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated 2 months ago
• RajLabMSSM / catalogueR
  Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
  ☆14Updated 3 years ago
• hakyimlab / PredictDB_Pipeline_GTEx_v7
  PredictDB Pipeline for GTEx v7 data
  ☆17Updated 3 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆35Updated 5 years ago
• FinucaneLab / fine-mapping-inf
  Fine-mapping with infinitesimal effects
  ☆20Updated 7 months ago
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆24Updated 4 years ago
• yiminghu / post-GWAS-pipeline
  A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data
  ☆29Updated 3 years ago
• GP2code / GP2-Multiancestry-metaGWAS
  ☆12Updated 2 years ago
• jrs95 / gassocplot2
  Regional association plots
  ☆24Updated last year
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆16Updated 4 years ago
• RajLabMSSM / echolocatoR
  Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
  ☆42Updated 2 years ago
• jokamoto97 / INTACT
  Integration of TWAS and Colocalization Analysis
  ☆17Updated last year
• EMO-Consortium / GeneticCorrelation
  ☆12Updated 2 years ago
• swvanderlaan / MetaGWASToolKit
  A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies
  ☆16Updated 2 weeks ago
• borangao / MESuSiE
  ☆21Updated 5 months ago
• oliviasabik / RACER
  An R package for generating comparative regional association plots
  ☆18Updated 3 months ago
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆18Updated 10 months ago
• yuanzhongshang / GIFT
  ☆21Updated last year
• opain / Calculating-FUSION-TWAS-weights-pipeline
  This is a pipeline for calculating weights for TWAS
  ☆32Updated 3 years ago
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated last year
• ipdgc / Manhattan-Plotter
  This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3
  ☆13Updated 6 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆32Updated last year