AlphaFind: Discover structure similarity across the entire known proteome
☆27Apr 14, 2026Updated 5 months ago
Alternatives and similar repositories for AlphaFind
Users that are interested in AlphaFind are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Learned Metric Index (LMI) is a machine learning based data structure for fast look-up of approximate nearest neighbors in complex data.☆12Dec 14, 2025Updated 9 months ago
- Molstar Stories Webapp☆22Updated this week
- Protein Structure Archiver☆16Sep 10, 2025Updated last year
- Clusters protein chains based on CA distance difference☆19Updated this week
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- A comprehensive resource of binding sites on human surface proteins with binder seeds☆16Feb 26, 2025Updated last year
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 3 years ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19Sep 28, 2026Updated 2 weeks ago
- ML toolset for creating TED: The Encyclopedia of Domains☆29May 29, 2025Updated last year
- Simple program that scans all of the Internet for Minecraft servers☆14Oct 16, 2022Updated 3 years ago
- A Python interface to the Ensembl REST APIs, biological data at your fingertips.☆11Apr 17, 2024Updated 2 years ago
- ☆13May 24, 2026Updated 4 months ago
- PocketMaster is a flexible and automated tool for analyzing, clustering, and visualizing protein binding sites. It allows you to quickly …☆19Feb 22, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆24Oct 1, 2026Updated last week
- ☆11Jan 11, 2021Updated 5 years ago
- A generic mechanism for describing views used in molecular visualizations☆66Sep 22, 2026Updated 3 weeks ago
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Oct 4, 2026Updated last week
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated 2 years ago
- ☆31Oct 15, 2024Updated last year
- 2D portraits of 3D protein structures☆27May 14, 2026Updated 4 months ago
- DockCADD An automated computational framework for molecular docking☆15Mar 31, 2026Updated 6 months ago
- Python interface for the RCSB search API.☆20Mar 20, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆18May 11, 2026Updated 5 months ago
- Advanced steps of the OSCA book☆17Aug 26, 2026Updated last month
- ☆15Aug 13, 2023Updated 3 years ago
- ☆17Oct 3, 2023Updated 3 years ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆30Dec 21, 2023Updated 2 years ago
- Explicit crosslinks in AlphaFold 3☆22Mar 17, 2025Updated last year
- These are the famous Uppsala Software Factory programs, rescued into GitHub.☆10Nov 3, 2022Updated 3 years ago
- Build PharMeBINet from different sources.☆24Oct 5, 2026Updated last week
- Molstar PDBe implementation☆140Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Spatiotemporal identification of druggable binding sites using deep learning☆22Jul 13, 2026Updated 3 months ago
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- Course lectures☆17Updated this week
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Updated this week
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated last year
- SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression pro…☆15Oct 16, 2017Updated 8 years ago
- Cloud-based molecular docking for everyone☆12Jul 1, 2024Updated 2 years ago