kiharalab / Distance-AF
Public version for Distance-AF
☆21Updated 11 months ago
Alternatives and similar repositories for Distance-AF:
Users that are interested in Distance-AF are comparing it to the libraries listed below
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆31Updated last month
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆43Updated 3 months ago
- Generative diverse protein backbones by protein language model☆31Updated 3 months ago
- Extension of ThermoMPNN for double mutant predictions☆30Updated 2 weeks ago
- Kuhlman Lab Installation of AlphaFold3☆23Updated this week
- code for SeqDance/ESMDance, biophysics-informed protein language models☆24Updated this week
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- ☆80Updated 6 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆28Updated 9 months ago
- Efficient implementatin of ESM family.☆54Updated 2 months ago
- protein structure generation with sparse all-atom denoising models☆29Updated last month
- A benchmark for 3D biomolecular structure prediction models☆56Updated 3 months ago
- ☆33Updated 6 months ago
- ☆36Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆38Updated 4 months ago
- ☆64Updated last week
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆65Updated 7 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆36Updated 5 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆33Updated 10 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆36Updated 11 months ago
- Efficient manipulation of protein structures in Python☆52Updated 4 months ago
- ☆38Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆44Updated 4 months ago
- Baseline model for PPB-Affinity benchmark data☆21Updated 3 months ago
- Metrics for our protein design competitions.☆24Updated 4 months ago
- ☆20Updated 10 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆34Updated 4 months ago
- ☆27Updated 2 years ago
- ☆43Updated 6 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 8 months ago