Alternatives and similar repositories for pycom

Users that are interested in pycom are comparing it to the libraries listed below

• lehner-lab / domainome
  ☆16Updated last year
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆35Updated 2 years ago
• alirezaomidi / AFM-IDR
  Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"
  ☆16Updated last year
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated last year
• oxpig / p-IgGen
  p-IgGen: A Generative Paired Antibody Language Model
  ☆13Updated 8 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆31Updated last year
• Kortemme-Lab / local_protein_sequence_design
  Design a local part of a protein
  ☆19Updated 3 years ago
• bouralab / Prop3D
  A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…
  ☆38Updated last year
• Gleghorn-Lab / DSM
  Protein representation and design under a single training scheme
  ☆24Updated last month
• csi-greifflab / developability_profiling
  ☆27Updated 4 months ago
• SwitchLab-VIB / EvolveX
  EvolveX, a de novo antibody computational design pipeline.
  ☆15Updated 4 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• GradinaruLab / APPRAISE
  Rank binders by structure modeling
  ☆16Updated 10 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• CBIIT / KDS
  KDS software for Kinase Drug Selectivity
  ☆11Updated 2 years ago
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆25Updated 7 months ago
• KrishnaswamyLab / ImmunoStruct
  [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction
  ☆31Updated this week
• ihmwg / python-modelcif
  Python package for handling ModelCIF mmCIF and BinaryCIF files
  ☆13Updated last month
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆18Updated last year
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆16Updated 11 months ago
• Shen-Lab / CPAC
  [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction
  ☆17Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 6 months ago
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆27Updated 2 years ago
• MSDLLCpapers / promb
  Humanness of de-novo designed proteins
  ☆36Updated 8 months ago
• bouralab / DeepUrfold
  Explore protein fold space with deep generative models
  ☆16Updated last year
• gwlilabmit / FragFold
  Fragment binding prediction with ColabFold
  ☆41Updated 2 months ago
• Cardypro / StructureAnalyzer
  A program analyzing 3D protein structures from PDB to generate 2D binding motifs
  ☆15Updated 4 years ago
• aartikrish / de-novo-antibiotics
  This is the GitHub repository accompanying Krishnan, Anahtar, Valeri, et al., 2025
  ☆35Updated 7 months ago
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆13Updated last year
• sokrypton / roscon2024
  Tutorial files
  ☆12Updated last year