A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.
☆23Mar 13, 2026Updated 4 months ago
Alternatives and similar repositories for FlatProt
Users that are interested in FlatProt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ESMDynamic repo☆25Jun 26, 2026Updated last month
- MDPath - A tool for calculating allosteric communication pathways in proteins by analyzing the mutual information of residue dihedral ang…☆31Jul 27, 2026Updated 2 weeks ago
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆33Jun 25, 2026Updated last month
- ☆33Mar 2, 2026Updated 5 months ago
- Open-source Deep Learning Framework for Allosteric Pocket Prediction☆17Jul 31, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Prediction of Protein-Small molecule binding affinities☆22Oct 1, 2025Updated 10 months ago
- Rendering protein mutation movies from predicted 3D structures☆20Dec 7, 2023Updated 2 years ago
- ☆54Apr 23, 2026Updated 3 months ago
- ☆17Feb 27, 2026Updated 5 months ago
- Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)☆19Aug 3, 2026Updated last week
- A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set o…☆35Dec 21, 2025Updated 7 months ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆41Sep 27, 2024Updated last year
- Code for running BinderFlow☆66Jun 22, 2026Updated last month
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46May 22, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A set a basic Python scripts to edit a multiple sequence alignment and generate a protein consensus sequence☆19Jun 9, 2022Updated 4 years ago
- ☆19Apr 13, 2026Updated 3 months ago
- Rapid Generation of Rare Event Pathways Using Direction Guided Adaptive Sampling: From Ligand Unbinding to Protein (Un)Folding☆38Aug 2, 2026Updated last week
- Web cards/apps describing peptides☆31Apr 26, 2023Updated 3 years ago
- ☆318Jun 16, 2026Updated last month
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆83May 1, 2026Updated 3 months ago
- ☆18Dec 5, 2025Updated 8 months ago
- ☆37Jun 10, 2025Updated last year
- a universal molecular interaction modeling platform based on AlphaFold3, supporting structure prediction and analysis for various recepto…☆49Nov 20, 2025Updated 8 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations☆16Aug 3, 2026Updated last week
- Toolkit for alphafold3 input and output files☆106Jul 31, 2026Updated last week
- GUI for Boltz☆35Jun 11, 2025Updated last year
- A Multi-modal System for Automated Mining of Protein-Ligand Bioactivity Data from Literature☆95May 9, 2026Updated 3 months ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆63Updated this week
- ☆51Jun 15, 2026Updated last month
- The package of ProBuilder from Longxing Cao lab☆22Jan 19, 2026Updated 6 months ago
- A toolkit developed to predict and analyze PROTAC-mediated ternary complexes using AlphaFold3 and Boltz-1.☆44Jul 17, 2025Updated last year
- MD_quick_plot helps you plot MD simulation data figures using structural and trajectory files. Compatible formats include GROMACS, AMBER,…☆24Jul 26, 2026Updated 2 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- The codebase for EnzyGen2☆30Apr 20, 2026Updated 3 months ago
- ☆118Jan 3, 2026Updated 7 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆41Jan 2, 2026Updated 7 months ago
- DualBind is a 3D structure-based deep learning model with a dual-loss framework for accurate and fast protein-ligand binding affinity pre…☆24Oct 21, 2025Updated 9 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆257Jan 3, 2026Updated 7 months ago
- code and source data for de novo design of Kemp elimination paper☆26Sep 18, 2025Updated 10 months ago
- Explicit crosslinks in AlphaFold 3☆22Mar 17, 2025Updated last year