softnanolab / boileroomLinks
Protein prediction models implemented with Modal
☆25Updated 2 weeks ago
Alternatives and similar repositories for boileroom
Users that are interested in boileroom are comparing it to the libraries listed below
Sorting:
- Protein Engineering via Exploration of an Energy Landscape☆83Updated 3 weeks ago
- Efficient manipulation of protein structures in Python☆58Updated last month
- Metrics for our protein design competitions.☆35Updated last year
- Kuhlman Lab Installation of AlphaFold3☆36Updated last month
- ☆71Updated 7 months ago
- One protein is all you need☆45Updated last week
- A Unified Approach to Protein Engineering☆42Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆56Updated 5 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated 3 weeks ago
- ☆39Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆45Updated last week
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Structure prediction of alternative protein conformations☆80Updated 8 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆55Updated last month
- Code for deep learning guided design of dynamic proteins☆31Updated last year
- ☆88Updated 2 weeks ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated last week
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 7 months ago
- Explicit crosslinks in AlphaFold 3☆23Updated 7 months ago
- Neural Iterative Selection-Expansion using LASErMPNN and Boltz-2x☆27Updated 2 weeks ago
- ☆36Updated last year
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 6 months ago
- ☆47Updated 9 months ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆27Updated 2 years ago
- Python package to manage protein structures and their annotations☆44Updated last year
- Modelling protein conformational landscape with Alphafold☆53Updated 2 months ago
- Some scripts that I keep using over and over.☆20Updated 3 months ago
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆44Updated 2 months ago
- ☆41Updated last year
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆59Updated 7 months ago