Protein prediction models implemented with Modal
☆30Mar 9, 2026Updated 3 weeks ago
Alternatives and similar repositories for boileroom
Users that are interested in boileroom are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Protein Engineering via Exploration of an Energy Landscape☆131Mar 10, 2026Updated 2 weeks ago
- ☆17May 15, 2025Updated 10 months ago
- Benchmarking scripts for Gaia☆14Apr 10, 2025Updated 11 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Algorithm for identifying hydrogen bond networks in CG proteins to implement Go-like Martini 3 models☆16Oct 25, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆32Feb 12, 2026Updated last month
- AbBFN2: A flexible antibody foundation model based on Bayesian Flow Networks☆39Jun 4, 2025Updated 9 months ago
- Home of the public Martini 3 lipid parameters☆22Sep 29, 2025Updated 6 months ago
- Code for designing biased protein states☆73Feb 13, 2026Updated last month
- ☆56Feb 27, 2026Updated last month
- Bias-controlled 3D generative framework for structure-based ligand design☆17Nov 2, 2022Updated 3 years ago
- A standard library for biological research.☆32Sep 2, 2025Updated 6 months ago
- Repository of the data for PLUMED Masterclass 22.3☆14Jul 10, 2024Updated last year
- Code and notebook for our paper "Assessing interaction recovery of predicted protein-ligand poses"☆20Oct 2, 2024Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Collective variables by artificial neural networks☆10Mar 16, 2022Updated 4 years ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆28Mar 7, 2026Updated 3 weeks ago
- ☆46Dec 30, 2025Updated 3 months ago
- P2DFlow: A Protein Ensemble Generative Model with SE(3) Flow Matching☆43May 22, 2025Updated 10 months ago
- Pytorch implementation of DeepNovoV2, a state-of-the-art de novo peptide sequencing model.☆27May 21, 2019Updated 6 years ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Sep 10, 2024Updated last year
- Code for the paper "Learning to engineer protein flexibility".☆23Updated this week
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Mar 22, 2024Updated 2 years ago
- Molecular Dynamics on Google Compute Engine, Colab, AWS (Amazon Web Services) and other Cloud Computing services☆24Oct 18, 2025Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Pipeline for exploring protein families using homology based or vector representation based methods to generate clusters in sequence spac…☆18Mar 6, 2026Updated 3 weeks ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated last year
- protein structure generation with sparse all-atom denoising models☆60Updated this week
- ☆14Apr 16, 2024Updated last year
- ☆16Sep 26, 2025Updated 6 months ago
- Prediction of Protein-Small molecule binding affinities☆21Oct 1, 2025Updated 5 months ago
- ☆15Feb 27, 2026Updated last month
- ☆15Jun 11, 2021Updated 4 years ago
- Simulation-Enabled Estimation of Kinetic Rates - Version 2☆35Dec 10, 2025Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆20Oct 9, 2025Updated 5 months ago
- ProtSpace is program that helps in visualizing and investigating our protein embedding space.☆46Mar 19, 2026Updated last week
- Web-Scarping tool for downloading the content of the following publishers: Elsevier, RSC, Web of Science, Springer Nature , Wiley.☆37Jun 24, 2025Updated 9 months ago
- Implementation for SuperWater☆42Jan 9, 2026Updated 2 months ago
- A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files☆13Apr 29, 2024Updated last year
- A predictor of enzyme optimal temperature☆14Mar 13, 2025Updated last year
- SciQAG is a novel framework for automatically generating high-quality science question-answer pairs from a large corpus of scientific lit…☆33Mar 24, 2025Updated last year