softnanolab / boileroomLinks
Protein prediction models implemented with Modal
☆23Updated 2 weeks ago
Alternatives and similar repositories for boileroom
Users that are interested in boileroom are comparing it to the libraries listed below
Sorting:
- Protein Engineering via Exploration of an Energy Landscape☆75Updated last week
- Kuhlman Lab Installation of AlphaFold3☆30Updated 3 months ago
- ☆70Updated 5 months ago
- Metrics for our protein design competitions.☆35Updated 10 months ago
- ☆38Updated 11 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 3 months ago
- Efficient manipulation of protein structures in Python☆56Updated 9 months ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆33Updated 4 months ago
- A Unified Approach to Protein Engineering☆42Updated last year
- Explicit crosslinks in AlphaFold 3☆22Updated 5 months ago
- Plugin for folding sequences directly in PyMOL☆27Updated 3 weeks ago
- Code for deep learning guided design of dynamic proteins☆30Updated last year
- Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models☆29Updated 8 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆62Updated 6 months ago
- Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention☆53Updated 2 months ago
- Structure prediction of alternative protein conformations☆77Updated 6 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆38Updated 2 months ago
- ☆86Updated last month
- A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.☆17Updated last month
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆58Updated 5 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated 3 weeks ago
- ☆36Updated last year
- ☆44Updated 11 months ago
- ☆13Updated 3 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆72Updated this week
- Modelling protein conformational landscape with Alphafold☆51Updated last month
- ☆19Updated 10 months ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆25Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- Fast deep learning methods for large-scale protein-protein interaction screening☆51Updated 3 weeks ago