WGLab / SeqMuleLinks
Automated human exome/genome variants detection from FASTQ files
☆23Updated 4 years ago
Alternatives and similar repositories for SeqMule
Users that are interested in SeqMule are comparing it to the libraries listed below
Sorting:
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 5 years ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Updated 6 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- A software for calculating telomere length☆73Updated 7 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated 10 months ago
- ☆26Updated last year
- Filters for false-positive mutation calls in NGS☆34Updated 6 years ago
- ☆51Updated 6 years ago
- Microsatellite instability (MSI) detection for cfDNA samples.☆20Updated 4 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 5 months ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- Long read to rMATS☆32Updated 2 years ago
- ☆46Updated 6 years ago
- An awk-like VCF parser☆56Updated 2 years ago
- Code associated with 2019 manuscript entitled "Transcript expression-aware annotation improves rare variant discovery and interpretation…☆34Updated 3 years ago
- A tool for evaluating RNA seq mapping☆22Updated 6 years ago
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Updated 5 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆29Updated 3 years ago
- CN-Learn☆30Updated 6 years ago
- microRNA PREdiction From small RNA-seq data☆31Updated 8 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Updated 9 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 8 years ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆21Updated 3 years ago
- MSKCC Reis-Filho Lab pipeline thingy☆18Updated last week
- ☆35Updated 4 years ago