aim-uofa / BA-DDGLinks
[ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions
☆38Updated 5 months ago
Alternatives and similar repositories for BA-DDG
Users that are interested in BA-DDG are comparing it to the libraries listed below
Sorting:
- [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".☆30Updated last year
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆30Updated last year
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆69Updated last year
- [NeurIPS 2024] The implementation for the paper "Geometric Trajectory Diffusion Models".☆31Updated last month
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆96Updated 2 years ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆61Updated 6 months ago
- [ICLR 2024] "Latent 3D Graph Diffusion" by Yuning You, Ruida Zhou, Jiwoong Park, Haotian Xu, Chao Tian, Zhangyang Wang, Yang Shen☆52Updated last year
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆89Updated 3 months ago
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆47Updated last year
- Learning Harmonic Molecular Representations on Riemannian Manifold, ICLR, 2023☆23Updated 2 years ago
- ☆78Updated 2 months ago
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Updated 2 years ago
- ☆193Updated last year
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆199Updated last month
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆90Updated 4 months ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆63Updated 11 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 3 months ago
- Code for paper: "Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design"☆59Updated 3 months ago
- DiffModeler: a diffusion model based protein complex structure modeling tool.☆52Updated 3 months ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆90Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆118Updated 6 months ago
- ☆76Updated 6 months ago
- ☆10Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated last year
- Official repository of ReactZyme☆36Updated 10 months ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆91Updated 7 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆166Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year