ml-jku / Prot-xLSTM
☆11Updated 2 months ago
Alternatives and similar repositories for Prot-xLSTM:
Users that are interested in Prot-xLSTM are comparing it to the libraries listed below
- Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning☆27Updated 9 months ago
- Differentiable Pairing using Alignment-based Language Models☆19Updated last year
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆35Updated 3 months ago
- Shows some of the ways molecule generation and optimization can go wrong☆16Updated last year
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆20Updated 6 months ago
- ☆25Updated 8 months ago
- This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…☆11Updated 6 months ago
- Converts AlphaFold distograms into distance matrices and saves them into a number of formats☆11Updated 2 years ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆15Updated last year
- ☆22Updated 8 months ago
- ☆69Updated 2 years ago
- ☆42Updated this week
- ☆29Updated 7 months ago
- Useful functions for working with small molecules☆44Updated last month
- BARTSmiles, generative masked language model for molecular representations☆32Updated last year
- protein backbone refinement☆15Updated 5 months ago
- HyperPCM: Robust task-conditioned modeling of drug-target interactions☆36Updated 4 months ago
- ☆31Updated 9 months ago
- Curated list on Deep Transformers Applications on Biology and Chemistry☆18Updated last year
- Inpainting protein sequence and structure☆12Updated last year
- Fast and accurate molecular docking with an AI pose scoring function☆37Updated last year
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆21Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆55Updated 9 months ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆27Updated 11 months ago
- Comparison of active site and full kinase sequences for drug-target affinity prediction and molecular generation. Full paper: https://pub…☆36Updated 2 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆47Updated last month
- ☆26Updated 4 months ago