Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and Constraints".
☆14Jun 25, 2023Updated 3 years ago
Alternatives and similar repositories for DiffSDS
Users that are interested in DiffSDS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Mo…☆11Jun 25, 2023Updated 3 years ago
- ☆14May 25, 2022Updated 4 years ago
- The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…☆51Aug 22, 2024Updated last year
- ☆24Nov 6, 2024Updated last year
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆203Sep 18, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆183Jun 17, 2023Updated 3 years ago
- ☆10Feb 22, 2023Updated 3 years ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching P…☆89Jul 20, 2024Updated 2 years ago
- Implementation of NeurIPS24 paper "Generalized Protein Pocket Generation with Prior-Informed Flow Matching"☆21May 15, 2025Updated last year
- ☆12Nov 16, 2023Updated 2 years ago
- All-atom generative protein design using SE(3) flow matching☆27Feb 3, 2026Updated 5 months ago
- The official implementation of the ICML'24 paper "A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer".☆49Mar 19, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆28Oct 22, 2024Updated last year
- [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".☆31Aug 23, 2024Updated last year
- ☆32Feb 5, 2025Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆49Oct 28, 2023Updated 2 years ago
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆24Mar 19, 2025Updated last year
- ICLR 2026☆21Nov 20, 2025Updated 8 months ago
- The official implementation of the ECCV'24 paper MC-CoT: Boosting the Power of Small Multimodal Reasoning Models to Match Larger Models w…☆26May 19, 2024Updated 2 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 2 years ago
- BC-Design: A Biochemistry-Aware Framework for High-Precision Inverse Protein Folding https://www.biorxiv.org/content/10.1101/2024.10.28.6…☆22Nov 24, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆48Jul 11, 2025Updated last year
- PARCE version 1.0☆12Feb 1, 2021Updated 5 years ago
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆106Jul 30, 2024Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆70May 28, 2026Updated last month
- openteam-studio public version☆30Mar 27, 2026Updated 3 months ago
- Kuhlman Lab Installation of AlphaFold3☆42Mar 26, 2026Updated 3 months ago
- The official implementation of the CVPR'22 paper SimVP: Simpler Yet Better Video Prediction.☆300Feb 21, 2023Updated 3 years ago
- ☆14Jun 14, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆10Mar 10, 2023Updated 3 years ago
- graphs from Draw.io☆14Sep 26, 2024Updated last year
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆74May 20, 2026Updated 2 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- ☆12May 11, 2024Updated 2 years ago
- CLIP-based model for aligning epitopes to immune receptors☆11Apr 30, 2025Updated last year
- Application of All-in-Focus image processing created by Python (OpenCV Python, NumPy and Tkinter).☆14Aug 30, 2024Updated last year