GGchen1997 / BDI
This repository is the official implementation of Bidirectional Learning for Offline Infinite-width Model-based Optimization (NeurIPS 2022) (https://openreview.net/forum?id=_j8yVIyp27Q).
☆15Updated 2 years ago
Alternatives and similar repositories for BDI:
Users that are interested in BDI are comparing it to the libraries listed below
- Code for "Multi-Objective GFlowNets"☆14Updated last year
- ☆28Updated 2 years ago
- ☆16Updated last year
- Code for paper: "Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design"☆48Updated 2 months ago
- Code for our paper "Unlocking Guidance for Discrete State-Space Diffusion and Flow Models"☆15Updated 3 weeks ago
- Code for "Biological Sequence Design with GFlowNets", 2022☆73Updated 2 years ago
- Code to reproduce experiments in "Accelerating Bayesian Optimization for Protein Design with Denoising Autoencoders" (Stanton et al 2022)☆69Updated 11 months ago
- Benchmark for Biophysical Sequence Optimization Algorithms☆16Updated last week
- Supervised Training of Conditional Monge Maps☆17Updated last year
- Dirichlet Diffusion Score Model for Biological Sequence Generation.☆51Updated 2 months ago
- Repository for code and models for the paper "Extrapolative Controlled Sequence Generation via Iterative Refinement"☆16Updated last year
- ☆12Updated last year
- Benchmarks for Model-Based Optimization☆91Updated last year
- 📰 Must-Read Papers on Offline Model-Based Optimization 🔥☆22Updated last month
- [ICLR 2023] "HotProtein: A Novel Framework for Protein Thermostability Prediction and Editing" by Tianlong Chen*, Chengyue Gong*, Daniel …☆31Updated 2 years ago
- Official repository for the paper "Improving black-box optimization in VAE latent space using decoder uncertainty" (Pascal Notin, Jos é Mi…☆31Updated last year
- PyTorch implementation for our paper "Proximal Exploration for Model-guided Protein Sequence Design"☆36Updated last year
- ☆13Updated 2 years ago
- Baselines for Model-Based Optimization☆53Updated 3 years ago
- Baselines for Model-Based Optimization installation fixes and compatible with newer AMPERE+ GPUs (e.g. 3090)☆11Updated 2 years ago
- Code for the paper https://arxiv.org/abs/2402.04997☆77Updated last year
- ☆33Updated 10 months ago
- ☆17Updated last year
- [ICLR 2023] Learnable Randomness Injection (LRI) for interpretable Geometric Deep Learning.☆23Updated last year
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆89Updated 2 years ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆38Updated 11 months ago
- ☆12Updated last year
- Code for the paper Iterated Denoising Energy Matching for Sampling from Boltzmann Densities.☆53Updated 3 weeks ago
- NeurIPS24: Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization☆35Updated last month
- QGFN: Controllable Greediness with Action Values - Code☆10Updated 11 months ago