psipred / DeepMetaPSICOV
Deep ResNet-based protein contact prediction
☆19Updated 5 years ago
Alternatives and similar repositories for DeepMetaPSICOV:
Users that are interested in DeepMetaPSICOV are comparing it to the libraries listed below
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆16Updated last year
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆25Updated last year
- ☆29Updated 4 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 3 years ago
- Ultra-fast in-silico structure mutation☆32Updated 2 years ago
- ☆26Updated 7 months ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 2 years ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆26Updated 7 months ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆50Updated 3 weeks ago
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Updated 3 years ago
- ☆34Updated 2 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆32Updated 3 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated 11 months ago
- Improved ab initio protein structure reconstruction☆15Updated 7 years ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Predict the structure of immune receptor proteins☆48Updated 4 months ago
- ☆20Updated 2 years ago
- ☆64Updated last week
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- ☆27Updated 2 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆45Updated last year
- ☆24Updated 3 years ago
- A domain parser for Alphafold models☆34Updated last year
- Some scripts that I keep using over and over.☆18Updated 3 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆21Updated last year
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆24Updated 8 months ago
- ☆34Updated 3 years ago
- Modeling the effects of mutations in proteins using PyRosetta☆25Updated 7 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆17Updated 5 years ago