Alternatives and similar repositories for DeepViscosity

Users that are interested in DeepViscosity are comparing it to the libraries listed below

• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆13Updated last year
• csi-greifflab / developability_profiling
  ☆26Updated 2 months ago
• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆22Updated last month
• oxpig / Humatch
  Fast, gene-specific joint humanisation of antibody heavy and light chains.
  ☆18Updated last week
• mgreenig / IgCraft
  Versatile human antibody sequence design
  ☆20Updated 5 months ago
• Lailabcode / DeepSP
  DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…
  ☆15Updated 3 months ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated this week
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆20Updated 4 months ago
• luwei0917 / AlphaFold3_PPI
  ☆15Updated last year
• regeneron-mpds / propermab
  ☆38Updated 7 months ago
• skalyaanamoorthy / PSLMs
  ☆21Updated last year
• PKUliujl / GeoSeqBuilder
  ☆29Updated 9 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆31Updated last year
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆25Updated 2 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆34Updated 2 years ago
• wells-wood-research / protein-design-archive
  Source code for The Protein Design Archive web application.
  ☆10Updated 2 weeks ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆48Updated this week
• masoudk / AsiteDesign
  ☆13Updated 2 years ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• lauramarie99 / ProtDesign2
  ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN
  ☆22Updated 8 months ago
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆16Updated 9 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆36Updated 2 years ago
• zeysun / AntiBMPNN
  Repo of AntiBMPNN project for antibody sequence design.
  ☆20Updated 5 months ago
• jaaamessszzz / BindingSitesFromFragments
  De novo design of small molecule binding sites into proteins
  ☆12Updated 4 years ago
• ld139 / ApoDock_public
  Code for ApoDock
  ☆21Updated 7 months ago
• NRGlab / Surfaces
  ☆15Updated last month
• bwicky / SAPP_DMX
  ☆25Updated 3 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆33Updated 2 years ago