JinyuanSun / mutation-stability-dataLinks
☆17Updated 2 years ago
Alternatives and similar repositories for mutation-stability-data
Users that are interested in mutation-stability-data are comparing it to the libraries listed below
Sorting:
- Open source code for AlphaFold to extract protein embeddings☆27Updated 4 years ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆83Updated 4 years ago
- Predict protein thermostability with ML☆19Updated last year
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆23Updated 2 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 3 years ago
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆117Updated last year
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆41Updated last year
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆62Updated last year
- A Python package for extracting protein sequence features☆61Updated 3 years ago
- predict stability change upon mutation☆28Updated last year
- DeepGO with Fuzzy DL☆30Updated 3 years ago
- ☆108Updated last year
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆25Updated last year
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆20Updated 2 years ago
- Official Pytorch implementation of PLUS (Protein sequence representations Learned Using Structural information), IEEE Access 2021☆41Updated 2 years ago
- Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.☆60Updated 4 years ago
- This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …☆58Updated 2 years ago
- Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations☆24Updated 5 years ago
- ☆35Updated 3 years ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Updated last year
- ☆17Updated 2 years ago
- Repository for publicly available deep learning models developed in Rosetta community☆119Updated 4 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆74Updated 4 years ago
- Code for our paper "Protein sequence design with a learned potential"☆79Updated 2 years ago
- ☆40Updated 9 months ago
- PaccMann models for protein language modeling☆43Updated 3 years ago
- ☆59Updated 2 years ago
- A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …☆27Updated 5 years ago