JinyuanSun / DDGScanLinks
DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein
☆48Updated last year
Alternatives and similar repositories for DDGScan
Users that are interested in DDGScan are comparing it to the libraries listed below
Sorting:
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated 2 months ago
- code for IDR binding paper 2025☆51Updated 7 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- Making Protein folding accessible to all!☆23Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆36Updated 2 years ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆65Updated 2 months ago
- PyDock Tutorial☆33Updated 7 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆48Updated 2 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- ☆39Updated last year
- Efficient manipulation of protein structures in Python☆56Updated last week
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 9 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆36Updated 3 months ago
- ☆87Updated last month
- Extension of ThermoMPNN for double mutant predictions☆43Updated last month
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆96Updated 2 years ago
- ☆44Updated 2 months ago
- ☆52Updated last month
- Modelling of Large Protein Complexes☆37Updated last month
- ☆44Updated last year
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- ☆71Updated 5 months ago
- ☆86Updated 11 months ago
- Analysis of alphafold and colabfold results☆31Updated 2 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ☆45Updated 8 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 3 months ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 3 months ago
- ☆75Updated 7 months ago
- ☆28Updated 7 months ago