amirmohan / epistatic-netView external linksLinks
Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e.g., protein functions).
☆18Jul 20, 2021Updated 4 years ago
Alternatives and similar repositories for epistatic-net
Users that are interested in epistatic-net are comparing it to the libraries listed below
Sorting:
- Library for epidemics on hypergraphs☆12May 13, 2024Updated last year
- Repository for code and models for the paper "Extrapolative Controlled Sequence Generation via Iterative Refinement"☆16Mar 5, 2024Updated last year
- ☆50Dec 2, 2024Updated last year
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Sep 18, 2025Updated 4 months ago
- Accelerating Network Layouts Using Graph Neural Networks☆26Feb 20, 2023Updated 2 years ago
- LogicCircuit is a program that helps build/simulate simple circuits using logic gates. It is meant to teach people the basics of how logi…☆10Jan 22, 2025Updated last year
- Code for our paper "Unlocking Guidance for Discrete State-Space Diffusion and Flow Models"☆33Apr 18, 2025Updated 9 months ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆110Sep 30, 2024Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Apr 8, 2021Updated 4 years ago
- ☆34May 1, 2025Updated 9 months ago
- ☆76Oct 27, 2021Updated 4 years ago
- Dataset corresponding to the paper: "Form2Seq : A Framework for Higher-Order Form Structure Extraction"☆10Feb 17, 2021Updated 4 years ago
- Python crossplatform library for Mac/linux and widows os.Complete system command, send alert, notifications, set brightness, recording au…☆11Apr 25, 2025Updated 9 months ago
- rebuilds and completes models of protein complexes using AlphaFold2☆15Jan 22, 2026Updated 3 weeks ago
- A minimal and interpretable Brian2 based DYNAP neuromorphic processor simulator for educational purposes.☆12Jun 23, 2022Updated 3 years ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆41May 29, 2024Updated last year
- Deciphering protein evolution and fitness landscapes with latent space models☆37Nov 2, 2021Updated 4 years ago
- ☆12Apr 9, 2025Updated 10 months ago
- An awesome list that curates the best Flet tools, tutorials, blogs and more.☆10Jan 8, 2023Updated 3 years ago
- ☆12Aug 15, 2023Updated 2 years ago
- Source code accompanying the NeurIPS 2022 paper "Learning Partial Equivariances From Data"☆10Nov 18, 2022Updated 3 years ago
- Demonstration of the UPGMA hierarchal clustering algorithm in Pandas, Seaborn, and Scipy☆11Sep 29, 2019Updated 6 years ago
- [ICLR 2024 Spotlight] Social Reward: Evaluating and Enhancing Generative AI through Million-User Feedback from an Online Creative Communi…☆11Mar 29, 2024Updated last year
- Implementations of the renormalization group-based diffusion model (RGDM).☆16Mar 10, 2025Updated 11 months ago
- ☆10Dec 8, 2023Updated 2 years ago
- ☆13Jun 5, 2024Updated last year
- ☆10Jun 14, 2023Updated 2 years ago
- A machine learning algorithm that estimates the directions of arrival and relative levels of an arbitrary number of sound sources using r…☆12Dec 10, 2022Updated 3 years ago
- ☆10Apr 30, 2025Updated 9 months ago
- RSSI-based OFDM signal classification using a machine learning algorithm.☆12May 15, 2018Updated 7 years ago
- Sample implementation accompanying the NeurIPS 2019 paper 'Powerset Convolutional Neural Networks' by Chris Wendler, Dan Alistarh, and Ma…☆10Oct 26, 2020Updated 5 years ago
- BlockCIrculantRNN (LSTM and GRU) using TensorFlow☆14Oct 30, 2018Updated 7 years ago
- A nonparametric variational information bottleneck (NVIB) layer in Pytorch☆11Apr 15, 2025Updated 9 months ago
- Supply chain planning using max flow formulated as mixed integer linear programming☆10May 20, 2020Updated 5 years ago
- ☆10Jun 24, 2023Updated 2 years ago
- Sublime Text 3 plugin for voice coding Python 3☆13Sep 15, 2022Updated 3 years ago
- A pipeline to build similarity maps of protein space☆40Oct 17, 2025Updated 3 months ago
- Programming Club IIT Kanpur Summer Project☆10Apr 6, 2017Updated 8 years ago
- A highly interactive single-cell bioinformatics workflow management library. Built with dataforest☆10Oct 4, 2022Updated 3 years ago