Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations
☆24Feb 20, 2020Updated 6 years ago
Alternatives and similar repositories for cu-tsp
Users that are interested in cu-tsp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UCSF BMI219 Deep Learning (2017), Coding example (Prediction of protein folding with RNN and CNN)☆16May 10, 2017Updated 8 years ago
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 6 years ago
- ☆26Dec 4, 2019Updated 6 years ago
- Emap2sec is a computational tool to identify protein secondary structures☆16Jul 31, 2024Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆34Aug 5, 2021Updated 4 years ago
- The Swiss Army knife for carbohydrate structure validation, refinement and analysis☆29Mar 6, 2026Updated 2 weeks ago
- ☆65Jun 14, 2025Updated 9 months ago
- Program to create tautomers and ionisation states relevant to physiological pH.☆10May 8, 2017Updated 8 years ago
- A PyTorch framework for prediction of tertiary protein structure☆193Jun 8, 2021Updated 4 years ago
- AstraZeneca add-ons to Orange.☆23Jun 15, 2020Updated 5 years ago
- A Prot paper related materials☆11Sep 5, 2022Updated 3 years ago
- ☆10Nov 10, 2023Updated 2 years ago
- Learning Neural Generative Dynamics for Molecular Conformation Generation (ICLR 2021)☆22Sep 20, 2021Updated 4 years ago
- Multiobjective De Novo Drug Design with Recurrent Neural Networks and Nondominated Sorting☆18Jan 20, 2020Updated 6 years ago
- Tool for modelling the CDRs of antibodies☆35Nov 10, 2022Updated 3 years ago
- ☆10Apr 22, 2019Updated 6 years ago
- Bib'23: Improved the Heterodimer Protein Complex Prediction with Protein Language Models☆15Dec 21, 2023Updated 2 years ago
- ☆13Jul 11, 2017Updated 8 years ago
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆15Aug 31, 2024Updated last year
- Data for the paper "A Dataset for Learning University STEM Courses at Scale" by Zhang et al., 2022.☆15Nov 22, 2022Updated 3 years ago
- Kinome-wide structural pocket similarity☆10Dec 26, 2022Updated 3 years ago
- ☆17Dec 10, 2022Updated 3 years ago
- Implementations of the renormalization group-based diffusion model (RGDM).☆16Mar 10, 2025Updated last year
- ☆13Sep 8, 2021Updated 4 years ago
- RDKit code for the JCIM article☆17Aug 17, 2013Updated 12 years ago
- Prediction of protein contact map☆20Feb 2, 2021Updated 5 years ago
- Code for "A Deep Learning Framework for Flexible Docking and Design"☆17Sep 29, 2022Updated 3 years ago
- A Python toolkit to compute molecular features and predict activities and properties of small molecules☆21Jan 28, 2022Updated 4 years ago
- Supplementary data for the ACME algorithm☆23Oct 2, 2022Updated 3 years ago
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Jun 13, 2022Updated 3 years ago
- Trainable AlphaFold implementation in JAX☆158Aug 6, 2022Updated 3 years ago
- Recurrent Geometric Networks for end-to-end differentiable learning of protein structure☆325Aug 1, 2019Updated 6 years ago
- Deep ResNet-based protein contact prediction☆20Mar 30, 2020Updated 5 years ago
- Implementation of GEFA: Early Fusion Approach in Drug-Target Affinity Prediction☆22Sep 30, 2020Updated 5 years ago
- ☆32Feb 5, 2025Updated last year
- A parallel molecular docking program based on AutoDock Vina☆19Sep 29, 2025Updated 5 months ago
- ☆18Nov 24, 2019Updated 6 years ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆175Feb 25, 2024Updated 2 years ago
- ChEMBL Similarity Search☆18Nov 28, 2020Updated 5 years ago