predict stability change upon mutation
☆31Jun 28, 2024Updated last year
Alternatives and similar repositories for ddgun
Users that are interested in ddgun are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Dec 15, 2022Updated 3 years ago
- Predicting the effect of mutations on protein stability using a simple orientational potential.☆20Jul 5, 2024Updated last year
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆119Dec 20, 2023Updated 2 years ago
- Demos of many Rosetta applications☆25Jun 10, 2025Updated 11 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆69Mar 9, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆10Nov 10, 2023Updated 2 years ago
- ☆38Sep 21, 2023Updated 2 years ago
- A Python framework for the rapid modeling of glycans☆19Oct 13, 2025Updated 7 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Mar 21, 2024Updated 2 years ago
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 2 years ago
- This repo contains the collection of codes to find designer interfacial mutations☆17Sep 4, 2023Updated 2 years ago
- ☆18Dec 10, 2022Updated 3 years ago
- Predict protein thermostability with ML☆21Aug 20, 2024Updated last year
- Modeling the effects of mutations in proteins using PyRosetta☆27Jan 26, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆21Oct 31, 2024Updated last year
- Python Toolbox For Rosetta Silent Files Processing☆16May 23, 2019Updated 7 years ago
- ☆57Apr 15, 2026Updated last month
- ☆35Dec 15, 2023Updated 2 years ago
- A Python package to generate free energy landscape (FEL) of molecular dynamics (MD) trajectory obtained from GROMACS. It also extracts th…☆14Apr 4, 2025Updated last year
- 『Pythonで動かしてはじめる量子化学計算』(コロナ社,2024)☆24Jun 5, 2024Updated last year
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆42Sep 16, 2025Updated 8 months ago
- ☆22Mar 28, 2024Updated 2 years ago
- Protocols and tools to run (automated) atomistic simulations of enzyme-ligand systems☆21Oct 11, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆28May 26, 2025Updated 11 months ago
- ☆13Dec 5, 2024Updated last year
- De novo protein structure prediction using iteratively predicted structural constraints☆60Jan 30, 2022Updated 4 years ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆30Oct 28, 2022Updated 3 years ago
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆15Jan 23, 2026Updated 4 months ago
- ☆12Nov 16, 2023Updated 2 years ago
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆24Jun 3, 2023Updated 2 years ago
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆12May 10, 2026Updated 2 weeks ago
- A series of scripts that facilitate the prediction of user-defined protein structural properties using AlphaFold2☆12Aug 28, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Structure-aware PRotein ligand INTeraction (SPRINT) is a ultrafast deep learning framework for drug-target interaction prediction.☆18Feb 19, 2026Updated 3 months ago
- A bare metal Python library for building and manipulating protein molecular structures☆20Updated this week
- ☆20Oct 4, 2022Updated 3 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆252Mar 26, 2026Updated last month
- Enhanced protein mutational sampling using time-lagged variational autoencoders☆30Sep 17, 2018Updated 7 years ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Tokenizing Loops of Antibodies☆34Nov 23, 2025Updated 6 months ago