Alternatives and similar repositories for ddgun

Users that are interested in ddgun are comparing it to the libraries listed below

• JinyuanSun / DDGScan
  DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein
  ☆47Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆21Updated last week
• dina-lab3D / CombFold
  ☆83Updated 8 months ago
• chaconlab / korpm
  Predicting the effect of mutations on protein stability using a simple orientational potential.
  ☆16Updated 11 months ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆56Updated 2 weeks ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆48Updated 2 years ago
• AbSciBio / igdesign
  ☆40Updated 4 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆54Updated 7 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆40Updated last month
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆33Updated last month
• cmbi / dssp
  The DSSP building software
  ☆43Updated last year
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆29Updated 11 months ago
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆66Updated 2 weeks ago
• KULL-Centre / _2024_cagiada_stability
  ☆67Updated 2 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆59Updated 3 months ago
• proteinphysiologylab / frustratometeR
  ☆36Updated 7 months ago
• mattarnoldbio / alphapickle
  ☆31Updated last year
• Protein-Engineering-Framework / PyPEF
  PyPEF – Pythonic Protein Engineering Framework
  ☆24Updated last week
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆88Updated last year
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆32Updated last year
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last year
• lhatsk / AlphaLink
  AlphaLink: Integrating crosslinking MS data into OpenFold
  ☆67Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆41Updated last month
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆56Updated last year
• oxpig / dlab-public
  Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
  ☆31Updated 2 years ago