A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. PROST uses colab AlhpaFold2 for the prediction of pdb struture from FASTA sequence.
☆24Jun 3, 2023Updated 3 years ago
Alternatives and similar repositories for PROST
Users that are interested in PROST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MVP (Qi et al 2021) source code☆17May 11, 2021Updated 5 years ago
- ☆13Sep 29, 2023Updated 2 years ago
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆12Dec 10, 2023Updated 2 years ago
- ☆57Apr 15, 2026Updated 2 months ago
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆120Dec 20, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆10Sep 13, 2021Updated 4 years ago
- ☆91Nov 25, 2025Updated 7 months ago
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year
- This repository contains the codebase for the paper "Leveraging ancestral sequence reconstruction for protein representation learning".☆13Jun 24, 2026Updated last week
- Predicting the effect of mutations on protein stability using a simple orientational potential.☆20Jul 5, 2024Updated 2 years ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last month
- ☆17Jun 2, 2024Updated 2 years ago
- A transformer model to predict pathogenic mutations☆12Jun 25, 2025Updated last year
- ☆15Jun 7, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- workflow to analysis of whole-exome-sequencing☆12Feb 12, 2020Updated 6 years ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆31Mar 4, 2025Updated last year
- 基于BmobPush SDK开发的官方Android版示例。☆13Apr 14, 2020Updated 6 years ago
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆15Jan 23, 2026Updated 5 months ago
- Constraint-based Metabolic Modeling Course☆11Jul 25, 2022Updated 3 years ago
- A project - tutorial. Differential expression of RNAseq raw counts data using a Real world dataset in R. Packages covered 'DESeq2' and 'E…☆13Nov 18, 2022Updated 3 years ago
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆39Nov 25, 2024Updated last year
- ☆38Sep 21, 2023Updated 2 years ago
- protein docking stuff☆52Apr 2, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- predict stability change upon mutation☆31Jun 28, 2024Updated 2 years ago
- Tool(s) for cleaning, munging and analysing PDB files for structural bioinformatics analysis.☆15May 29, 2019Updated 7 years ago
- ☆72Apr 8, 2025Updated last year
- ☆30May 24, 2024Updated 2 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 7 months ago
- Cross-protein transfer learning for variant effect prediction☆21Sep 13, 2023Updated 2 years ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Image classification using SVM, KNN, Bayes, Adaboost, Random Forest and CNN.Extracting features and reducting feature dimension using T-S…☆13Aug 12, 2020Updated 5 years ago
- ☆16Sep 29, 2025Updated 9 months ago
- A collection of molecular modelling tools for UCSF Chimera☆18Mar 26, 2019Updated 7 years ago
- Course website for Johns Hopkins BSPH Statistical Computing (Biostatistics 140.776) in Fall 2022☆18Oct 20, 2022Updated 3 years ago
- ☆97Oct 14, 2025Updated 8 months ago
- ☆15Apr 3, 2025Updated last year
- ☆20Apr 16, 2024Updated 2 years ago