An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
☆26Mar 21, 2024Updated 2 years ago
Alternatives and similar repositories for antiberty-pytorch
Users that are interested in antiberty-pytorch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆13Apr 23, 2024Updated last year
- Antibody-specific masked language model☆72Mar 5, 2026Updated last month
- ☆12Dec 2, 2024Updated last year
- ☆28Aug 26, 2025Updated 7 months ago
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Sep 18, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆11May 22, 2024Updated last year
- ☆13Mar 28, 2025Updated last year
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆26Mar 30, 2023Updated 3 years ago
- ☆24May 19, 2025Updated 11 months ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆413Sep 3, 2023Updated 2 years ago
- Public repository describing training and testing of AntiBERTa.☆62Apr 14, 2023Updated 3 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆129Feb 26, 2025Updated last year
- Code for humanization of antibody and nanobody☆78Aug 28, 2025Updated 7 months ago
- Synthetic Accessibility via Fragment Assembly Generation☆23Apr 9, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Features Based Conformational Clustering of MD trajectories. See details at:☆10Nov 20, 2025Updated 5 months ago
- ☆45Apr 1, 2025Updated last year
- ☆135Aug 8, 2024Updated last year
- An antibody-specific language model focusing on NGL prediction☆37Aug 22, 2024Updated last year
- Fitness landscapes for antibodies☆167Mar 23, 2026Updated 3 weeks ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 11 months ago
- ☆13Apr 8, 2025Updated last year
- ☆12Oct 9, 2024Updated last year
- Benchmarking deep learning models generating molecules in 3D☆18Apr 12, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated 9 months ago
- P2PXML: Deep Geometric Framework to Predict Antibody-Antigen Binding Affinity (Journal of Structural Biology)☆13Feb 24, 2026Updated last month
- A new python package to visualize molecules in dots hover☆13Feb 15, 2024Updated 2 years ago
- Protein language model customized for antibodies☆152Mar 21, 2025Updated last year
- ☆27Aug 8, 2025Updated 8 months ago
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆28Jun 21, 2023Updated 2 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆276Feb 14, 2024Updated 2 years ago
- Foundation model-driven lab☆29Mar 25, 2026Updated 3 weeks ago
- ☆26Apr 22, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆28Dec 6, 2022Updated 3 years ago
- Aligning protein generative models with experimental fitness☆120Mar 12, 2026Updated last month
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated 9 months ago
- ☆73Mar 7, 2024Updated 2 years ago
- ☆55Mar 12, 2026Updated last month
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆224Jan 3, 2026Updated 3 months ago
- CREMP: Conformer-Rotamer Ensembles of Macrocyclic Peptides for Machine Learning☆21Aug 13, 2024Updated last year