A machine learning tool to improve the effectiveness of strain engineering in synthetic biology
☆63May 11, 2026Updated last month
Alternatives and similar repositories for ART
Users that are interested in ART are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MineYourSymbiont : Targetted genome assembly for metagenomics pipeline.☆10Mar 3, 2023Updated 3 years ago
- A Transcriptomics-Proteomics Integration Pipeline☆21Apr 11, 2024Updated 2 years ago
- Code for "Disentangling images with Lie group transformations and sparse coding" (2023).☆13May 24, 2021Updated 5 years ago
- A rapid and low-memory multiple-genome aligner for closely related genomes☆26Sep 3, 2025Updated 9 months ago
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.☆24Apr 5, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Repository of standardized biological experimental data and metadata☆15Jan 9, 2025Updated last year
- ☆18Jan 19, 2026Updated 4 months ago
- PLAID (Plate Layouts using Artificial Intelligence Design) is a flexible constraint-programming model representing the Plate Layout Desig…☆18Updated this week
- teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …☆44Apr 27, 2026Updated last month
- R functions underlying ExpressAnalyst☆14May 26, 2026Updated 2 weeks ago
- ☆12Dec 12, 2024Updated last year
- Need a quick way to make sure your design/diagram/figure is color blind-friendly? Use this simulator to check out if your colors will ret…☆12Oct 31, 2020Updated 5 years ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- repository-based plasmid design☆31Nov 28, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Here, we describe the comparison of the most used algorithms in classical ML and DL to classify carcinogenic tumors described on 11_tumor…☆13Apr 13, 2020Updated 6 years ago
- Analysis of ensembles of metabolic network reconstructions☆22May 20, 2026Updated 3 weeks ago
- Contains CHARMING.py and its associated README.md☆12Oct 20, 2022Updated 3 years ago
- protein docking using a density-based descriptor for atoms charge and dynamics☆14Nov 17, 2022Updated 3 years ago
- NeurIPS17: [AttentiveChrome] Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chrom…☆27Feb 8, 2021Updated 5 years ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- Reinforcement Learning based bioretrosynthesis tool☆59Apr 2, 2025Updated last year
- Example usage of the Benchling API: https://docs.benchling.com/☆37Jun 10, 2025Updated last year
- A simple flow cytometry analyzer GUI.☆21Apr 29, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- benchmarking AI-powered docking methods from the perspective of virtual screening☆34Dec 26, 2024Updated last year
- (In development) Microservices full-stack single-page web app built with Typescript, React, Redux, Styled Components (for CSS-in-JS), Pyt…☆11Jun 3, 2026Updated last week
- ☆25Dec 2, 2024Updated last year
- ☆11Feb 18, 2021Updated 5 years ago
- Open database of scholarly journals☆11Oct 26, 2022Updated 3 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆84Sep 3, 2024Updated last year
- Repository for collective design of an iGEM DNA distribution☆45Apr 7, 2023Updated 3 years ago
- ☆20Jul 18, 2024Updated last year
- A couple of tools I find indispensable for post orthomcl down-stream analysis.☆11Oct 2, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Web application enabling users and software to browse, upload, and share synthetic biology designs☆83May 12, 2026Updated last month
- RSpace running on Docker☆12Updated this week
- Tutorial on how to use Ginkgo AI embedding APIs for scientific problems☆19Nov 22, 2024Updated last year
- Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features☆17Jun 29, 2018Updated 7 years ago
- A guide to running MaxQuant in Linux☆36Feb 10, 2020Updated 6 years ago
- Applied Quantitative Methods course at the College of Charleston☆21Apr 2, 2026Updated 2 months ago
- CobraMod is a Python 3 open-source package which enables modifying and extending genome-scale metabolic models with metabolic pathway inf…☆18May 11, 2026Updated last month