Alternatives and similar repositories for brendapy:

Users that are interested in brendapy are comparing it to the libraries listed below

• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆33Updated 2 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 4 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆90Updated last week
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆37Updated last year
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆53Updated 2 weeks ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆42Updated last year
• proteinphysiologylab / frustratometeR
  ☆35Updated 6 months ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆56Updated last month
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆83Updated last year
• JBEI / foldy
  Foldy: a web-based platform for interactive protein structure analysis
  ☆23Updated last month
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆78Updated last month
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆52Updated 3 months ago
• hiyama341 / teemi
  teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …
  ☆41Updated 2 months ago
• JudeWells / chainsaw
  ☆37Updated 6 months ago
• graik / biskit
  A Python platform for Structural Bioinformatics
  ☆56Updated last month
• Robaina / BRENDApyrser
  A Python parser for the BRENDA database
  ☆30Updated last year
• amirpandi / METIS
  METIS: A versatile active learning workflow for optimization of genetic and metabolic networks
  ☆27Updated 2 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆49Updated 4 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 3 weeks ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆64Updated 7 years ago
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆24Updated last month
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆34Updated last year
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆29Updated last year
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆29Updated last year
• elaspic / elaspic2
  Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…
  ☆21Updated 4 years ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆51Updated 7 months ago
• maranasgroup / dGPredictor
  ☆10Updated last year
• Faezov / PDBrenum
  ☆28Updated 11 months ago
• ncbi / SSDraw
  ☆85Updated last year