matthiaskoenig / brendapyLinks
BRENDA parser in python
☆22Updated 3 years ago
Alternatives and similar repositories for brendapy
Users that are interested in brendapy are comparing it to the libraries listed below
Sorting:
- scripts and facilities for in-silico mutagenesis with FoldX☆60Updated 2 months ago
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆30Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- PSIPRED Protein Secondary Structure Predictor☆58Updated 3 months ago
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆82Updated 7 months ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Updated 6 months ago
- A Python platform for Structural Bioinformatics☆57Updated 6 months ago
- A Python parser for the BRENDA database☆32Updated 2 years ago
- The DSSP building software☆47Updated 2 years ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆104Updated last month
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆65Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆106Updated last week
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Set of useful HADDOCK utility scripts☆55Updated 2 weeks ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- ☆84Updated last month
- Direct coupling analysis software for protein and RNA sequences☆52Updated 2 months ago
- 1D Feature Viewer☆53Updated this week
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Interactive Python notebooks for PDBe API training☆56Updated last week
- ☆37Updated 3 months ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated last month
- Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…☆43Updated this week
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- ☆30Updated 4 months ago
- ☆39Updated 4 years ago
- Mutation effects predicted from sequence co-variation☆69Updated 8 years ago
- analyse PDB files, run molecular-dynamics & analyse trajectories☆61Updated 7 years ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- Evolutionary velocity with protein language models☆94Updated last year