MMseqs2 app to run on your workstation or servers
☆120Jul 14, 2026Updated this week
Alternatives and similar repositories for MMseqs2-App
Users that are interested in MMseqs2-App are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multiple Protein Structure Alignment at Scale with FoldMason☆282May 11, 2026Updated 2 months ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,265Jul 1, 2026Updated 2 weeks ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆258Mar 26, 2026Updated 3 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ☆12Dec 2, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MMseqs2: ultra fast and sensitive search and clustering suite☆2,110Updated this week
- sensitive and precise assembly of short sequencing reads☆168Oct 11, 2024Updated last year
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆36Feb 1, 2026Updated 5 months ago
- ☆40Apr 9, 2026Updated 3 months ago
- Discovery of conserved gene clusters in multiple genomes☆135Jan 16, 2026Updated 6 months ago
- ColabFold on your local PC☆869Jul 1, 2026Updated 2 weeks ago
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- ☆136Jun 9, 2026Updated last month
- ☆18Aug 10, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Compressing protein structures effectively with torsion angles☆194Jun 30, 2026Updated 2 weeks ago
- Fast indexing and search of discontinuous motifs in protein structures☆199Jul 10, 2026Updated last week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 2 years ago
- SpacePHARER CRISPR Spacer Phage-Host pAiRs findER☆48May 8, 2024Updated 2 years ago
- UFCG: Universal Fungal Core Genes☆36Jul 29, 2025Updated 11 months ago
- ☆137Sep 14, 2022Updated 3 years ago
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆90Mar 12, 2026Updated 4 months ago
- Scripts to benchmark and train foldseek☆41Jun 17, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 6 months ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆28Aug 9, 2023Updated 2 years ago
- MiniFold: Simple, Fast and Accurate Protein Structure Prediction☆92Jul 10, 2025Updated last year
- Remote protein homology detection suite.☆627Aug 12, 2025Updated 11 months ago
- Making Protein folding accessible to all!☆2,838Updated this week
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆31Aug 9, 2024Updated last year
- Scripts to generate and analyze afdb clusters☆11Sep 15, 2023Updated 2 years ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 4 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Making Protein Design accessible to all via Google Colab!☆924Apr 6, 2026Updated 3 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆88Apr 21, 2026Updated 3 months ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆12Jan 7, 2026Updated 6 months ago
- Neural Networks for Protein Sequence Alignment☆139Nov 11, 2024Updated last year
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- ☆38Oct 16, 2024Updated last year
- Code for ColabDock paper☆157May 1, 2025Updated last year