fhalab / evSeqLinks
Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
☆34Updated 3 years ago
Alternatives and similar repositories for evSeq
Users that are interested in evSeq are comparing it to the libraries listed below
Sorting:
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆29Updated 10 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆61Updated 9 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆47Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 2 weeks ago
- Python package to manage protein structures and their annotations☆45Updated last year
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 5 months ago
- ☆86Updated 2 months ago
- Fast and accurate protein structure prediction☆56Updated last year
- Graph Network for protein-protein interface including language model features☆34Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆109Updated last month
- ☆55Updated 5 months ago
- Pipeline for protein-protein interaction prediction☆27Updated 3 years ago
- Machine learning prediction of enzyme optimum pH☆50Updated 8 months ago
- Fast protein structure searching or your money back☆118Updated this week
- Direct coupling analysis software for protein and RNA sequences☆56Updated 5 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Detection of remote homology by comparison of protein language model representations☆61Updated last year
- Contact map alignment☆42Updated 4 years ago
- ☆38Updated 6 months ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆111Updated 4 months ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆88Updated last week
- Machine learning-driven antibody design☆63Updated 2 years ago
- A domain parser for Alphafold models☆46Updated 2 years ago
- Deciphering protein evolution and fitness landscapes with latent space models☆36Updated 4 years ago
- Predict the structure of immune receptor proteins☆59Updated last year
- ☆47Updated last year
- ☆32Updated last year