Software for the visualization of sequence-function relationships
☆211Jan 6, 2026Updated 4 months ago
Alternatives and similar repositories for logomaker
Users that are interested in logomaker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python port of the R Bioconductor `seqLogo` package☆36Feb 20, 2026Updated 3 months ago
- WebLogo 3: Sequence Logos redrawn☆158Updated this week
- Python package for AAIndex database (https://www.genome.jp/aaindex/)☆14Apr 6, 2026Updated last month
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆48Mar 26, 2025Updated last year
- Efficient pythonic random access to fasta subsequences☆486Mar 19, 2026Updated 2 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- DSSPparser is an easy tool to parse dssp file, and can transform PDB format file to dssp format file by xssp,also support the tansfrom be…☆13Sep 20, 2022Updated 3 years ago
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆11Dec 3, 2023Updated 2 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated 2 years ago
- Publication-quality sequence logos in R☆227Feb 14, 2026Updated 3 months ago
- Python package to plot sequence logos☆29Sep 21, 2023Updated 2 years ago
- plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style☆17Dec 19, 2025Updated 5 months ago
- Biological sequence analysis for the modern age.☆274Updated this week
- HLA-I ligand predictor☆45Mar 19, 2026Updated 2 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆193Dec 1, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ExplaiNN: interpretable and transparent neural networks for genomics☆49Apr 1, 2025Updated last year
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆16Apr 4, 2024Updated 2 years ago
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 3 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Apr 10, 2023Updated 3 years ago
- A python extension for quick access to bigWig and bigBed files☆244Jan 14, 2026Updated 4 months ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆69Dec 2, 2024Updated last year
- Performant Pythonic GenomicRanges☆494Apr 23, 2026Updated last month
- Control PyMOL sessions via IPython☆61Nov 3, 2022Updated 3 years ago
- A reporting pipeline for visualization of immunopeptidomics MS data.☆16Nov 19, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Genomic interval operations on Pandas DataFrames☆191May 4, 2026Updated 3 weeks ago
- Fast alignment and preprocessing of chromatin profiles☆220Mar 20, 2026Updated 2 months ago
- A lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments.☆91Sep 24, 2025Updated 8 months ago
- This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge☆20Jun 11, 2020Updated 5 years ago
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆96Jul 11, 2023Updated 2 years ago
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆181Mar 19, 2026Updated 2 months ago
- ☆40Jul 3, 2025Updated 10 months ago
- ☆11Feb 10, 2025Updated last year
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Direct coupling analysis software for protein and RNA sequences☆61Jul 21, 2025Updated 10 months ago
- ☆19Mar 21, 2024Updated 2 years ago
- ☆50Sep 25, 2024Updated last year
- A command-line tool for reading SAM/BAM files and converted them directly to bigwig files.☆21Apr 15, 2026Updated last month
- python module to plot beautiful and highly customizable genome browser tracks☆884Jul 10, 2024Updated last year
- Library to visualize protein sequence features in Typescript using D3. This repository is based on calipho-sib/feature-viewer.☆24Feb 4, 2023Updated 3 years ago
- Create DSSP and HSSP files☆95Jul 18, 2024Updated last year