NanoASV official repo
☆18Nov 5, 2026Updated this week
Alternatives and similar repositories for NanoASV
Users that are interested in NanoASV are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Amplicon sequencing variants and taxonomic profiling from modern nanopore / HiFi long read amplicons.☆72Updated this week
- ☆14Dec 19, 2025Updated 10 months ago
- ☆14Sep 17, 2026Updated last month
- R package for distilling functional annotations of bacterial genomes and metagenomes☆12Feb 27, 2025Updated last year
- frame-shift correction for long-read (meta)genomics☆33Dec 11, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆21Oct 23, 2026Updated 2 weeks ago
- Chemical Hierarchy Approximation for secondary Metabolism clusters Obtained In Silico.☆14Sep 28, 2026Updated last month
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆31Jan 15, 2026Updated 9 months ago
- Modified fork of CURRENNT https://sourceforge.net/projects/currennt/☆11Sep 10, 2016Updated 10 years ago
- Workflow for MAG quality assessment and taxonomical annotation.☆15May 26, 2026Updated 5 months ago
- Dadaist2 🟨 Highway to R☆13Mar 7, 2025Updated last year
- ⚡🦠🧬📇 Rapid microbial genomes-to-report pipeline☆75Oct 27, 2026Updated last week
- TransAnnot - a fast transcriptome annotation pipeline☆20Jan 22, 2025Updated last year
- A pipeline for de novo transcriptome assembly of paired-end short reads from bulk RNA-seq☆29Oct 26, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pipeline for the Nanopore 16S and ITS long read clustering and taxonomy classification☆23Oct 20, 2026Updated 2 weeks ago
- Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project☆12May 25, 2022Updated 4 years ago
- A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment☆20Nov 12, 2025Updated 11 months ago
- A comprehensive prokaryotic genome annotation pipeline☆93Oct 12, 2026Updated 3 weeks ago
- ☆27Jun 20, 2023Updated 3 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆28Aug 24, 2022Updated 4 years ago
- A quality-checked and publicly available database of full-length 16S-ITS-23S rRNA operon sequences☆15Jul 9, 2026Updated 3 months ago
- PanTax: Strain-level metagenomic profiling using pangenome graphs☆54Jun 10, 2026Updated 4 months ago
- Gmove is a gene prediction tool☆21Oct 9, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆67Oct 12, 2026Updated 3 weeks ago
- The binning tool with dynamic contrastive learning and deep language model☆28Oct 21, 2026Updated 2 weeks ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆26Oct 24, 2025Updated last year
- MetagenOmic read Re-Assigner and abundance quantifier☆22Jun 24, 2026Updated 4 months ago
- ☆121Oct 16, 2026Updated 3 weeks ago
- A simple DSL2 workflow: tutorial☆26Mar 11, 2025Updated last year
- AC-DIAMOND is a DNA-protein alignment tool☆17Oct 11, 2023Updated 3 years ago
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆34Nov 2, 2025Updated last year
- Microbial Culture Media Knowledge Graph - Comprehensive collection of 10,000+ culture media recipes from major international repositories…☆12Oct 28, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.☆239May 9, 2026Updated 5 months ago
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality eu…☆26Updated this week
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆24Mar 20, 2026Updated 7 months ago
- Materials for the STAMPS 2022 course at the MBL in Woods Hole, MA, USA☆22Aug 2, 2022Updated 4 years ago
- Better and faster Rust implementation of the FragGeneScan gene prediction model for short and error-prone reads.☆31Feb 3, 2026Updated 9 months ago
- 🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs☆67Aug 28, 2026Updated 2 months ago
- KEGG Module Evaluation Tool☆33Mar 5, 2026Updated 8 months ago