python based queries for the proteomesoflife neo4j network database
☆14Jun 17, 2020Updated 6 years ago
Alternatives and similar repositories for proteomesoflife
Users that are interested in proteomesoflife are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆16Jun 28, 2024Updated last year
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Oct 19, 2019Updated 6 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- ☆27May 29, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆27Apr 18, 2018Updated 8 years ago
- MAGinator - Accurate SNV calling and profiling of MAGs☆27Mar 23, 2026Updated 2 months ago
- Web tool for exploring cell-cell ligand-receptor mediated communication networks☆23Aug 18, 2016Updated 9 years ago
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learn…☆11May 19, 2021Updated 5 years ago
- ProteoStorm: An Ultrafast Metaproteomics Database Search Framework☆11Jul 15, 2023Updated 2 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆18Jan 21, 2022Updated 4 years ago
- ☆18Jan 13, 2023Updated 3 years ago
- A Deep LEArning-based Mass Spectra Embedder for spectral similarity scoring☆12Jun 9, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated last year
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Mar 10, 2025Updated last year
- Tufte style plots for the browser☆15Dec 7, 2022Updated 3 years ago
- ☆12Mar 20, 2021Updated 5 years ago
- mist R package files☆10May 5, 2025Updated last year
- Pipeline for the generation and simulation of personalized Flux Balance Analysis models☆11Feb 14, 2021Updated 5 years ago
- Repository for scRNAseq study of human kidneys☆15Jun 14, 2019Updated 7 years ago
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆21Feb 11, 2025Updated last year
- (backup fork since google code is going down)☆12Mar 12, 2015Updated 11 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated last year
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 10 years ago
- Scalable pattern search optimization with dask☆22Apr 12, 2017Updated 9 years ago
- Testing KAN-based text generation GPT models☆19May 6, 2024Updated 2 years ago
- ☆16May 27, 2026Updated 3 weeks ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆17Oct 11, 2021Updated 4 years ago
- RNA dependent RNA Polymerase Palmprint Analysis☆13Aug 1, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Microbial analysis in TCGA data☆94Feb 23, 2024Updated 2 years ago
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15May 28, 2026Updated 3 weeks ago
- PhosIDN: an integrated deep neural network for improving protein phosphorylation site prediction by combining sequence and protein–protei…☆12Nov 30, 2020Updated 5 years ago
- ☆11Apr 11, 2017Updated 9 years ago
- Small utility to quickly find size and GC content of a fasta file. Can also extract sequence. Who doesn't like QUICK and DIRTY!☆13Aug 27, 2018Updated 7 years ago
- ☆14Jun 24, 2019Updated 6 years ago
- ☆20Jun 20, 2025Updated 11 months ago