haddocking / HADDOCK-antibody-antigenLinks
Material to run the HADDOCK antibody-antigen modelling protocol
☆22Updated last year
Alternatives and similar repositories for HADDOCK-antibody-antigen
Users that are interested in HADDOCK-antibody-antigen are comparing it to the libraries listed below
Sorting:
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- Scores for Hydrophobicity and Charges based on SASAs☆37Updated 3 months ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆19Updated 4 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated this week
- ☆26Updated last month
- PyDock Tutorial☆33Updated 7 years ago
- ☆25Updated 3 weeks ago
- ☆22Updated last month
- Physical energy function for protein sequence design☆33Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 2 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 3 months ago
- ☆50Updated 9 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆36Updated 2 years ago
- PPI version of Pythia☆17Updated last week
- Making Protein folding accessible to all!☆23Updated last year
- Prediction of protein melting temperatures directly from sequences☆10Updated last year
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- ☆35Updated 5 months ago
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- Code for ApoDock☆20Updated 5 months ago
- ☆18Updated last year
- ☆23Updated 4 years ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Extract the PAE & pLDDT value of Alphafold2 from .pkl to .png, .csv & .pdb file.☆22Updated 3 years ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆21Updated 6 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆28Updated last year
- Binding pocket optimization based on force fields and docking scoring functions☆34Updated 6 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- Repo contains source code of the SurfaceID paper☆24Updated last year