ohuelab / MEGADOCK-on-ColabLinks
MEGADOCK on Google Colaboratory
☆20Updated 2 years ago
Alternatives and similar repositories for MEGADOCK-on-Colab
Users that are interested in MEGADOCK-on-Colab are comparing it to the libraries listed below
Sorting:
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆35Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 5 months ago
- ☆22Updated 7 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 6 months ago
- ☆18Updated last year
- Code for ApoDock☆21Updated 8 months ago
- A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.☆19Updated 4 months ago
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆19Updated 9 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Updated last year
- EvolveX, a de novo antibody computational design pipeline.☆12Updated 2 months ago
- Code for deep learning guided design of dynamic proteins☆31Updated last year
- ☆27Updated 4 years ago
- Dockerized Version of the DiffDock model from MIT☆13Updated 2 years ago
- MD DaVis: A python package to analyze molecular dynamics trajectories of proteins☆17Updated 9 months ago
- ☆26Updated 3 months ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Updated 3 years ago
- Peptide Virtual Screening Pipeline☆11Updated 6 years ago
- KDS software for Kinase Drug Selectivity☆11Updated 2 years ago
- Plugin for folding sequences directly in PyMOL☆27Updated 4 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆19Updated last year
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- This is the GitHub repository accompanying Krishnan, Anahtar, Valeri, et al., 2025☆33Updated 6 months ago
- ☆15Updated 2 months ago
- Some scripts that I keep using over and over.☆21Updated 5 months ago
- Explicit crosslinks in AlphaFold 3☆23Updated 8 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated last year
- Protein Origami via Genetic Fusions☆16Updated 3 years ago
- Clusters protein chains based on CA distance difference☆16Updated 10 months ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆36Updated 7 months ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆18Updated 4 months ago