ohuelab / MEGADOCK-on-Colab

Related projects ⓘ

Alternatives and complementary repositories for MEGADOCK-on-Colab

• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 8 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆24Updated 7 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆25Updated last year
• LLNL / CRPCA
  Computationally Restoring the Potency of a Clinical Antibody
  ☆16Updated 8 months ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆15Updated 10 months ago
• tommyhuangthu / EvoEF2
  a fast and accurate physical energy function extended from EvoEF for protein sequence design
  ☆25Updated last year
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆24Updated last month
• eva-smorodina / antibody_developability
  ☆9Updated last year
• maltesie / bridge2
  GUI for interactive graph-based analyses of hydrogen bond networks in crystal structures and MD trajectories.
  ☆9Updated last year
• AspirinCode / GENiPPI
  Interface-aware molecular generative framework for protein-protein interaction modulators
  ☆11Updated this week
• Furman-Lab / PatchMAN
  ☆24Updated 3 months ago
• pepamengual / UEP
  ☆9Updated last year
• djmaity / md-davis
  MD DaVis: A python package to analyze molecular dynamics trajectories of proteins
  ☆14Updated 7 months ago
• Merck / PepSeA
  ☆21Updated 3 years ago
• NRGlab / Surfaces
  ☆11Updated 5 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆17Updated 4 months ago
• AspirinCode / iPPIGAN
  De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors
  ☆18Updated 2 weeks ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆20Updated last year
• Nucleus2014 / protease-gcnn-pytorch
  ☆20Updated last year
• BioComputingUP / ring-pymol
  This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua
  ☆23Updated 9 months ago
• strauchlab / scaffold_design
  ☆14Updated 8 months ago
• compbiomed-unito / acdc-nn
  ☆19Updated last year
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆18Updated 10 months ago
• BrooksResearchGroup-UM / FASTDock
  FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook
  ☆19Updated last year
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated 2 months ago
• lcbc-epfl / metal-site-prediction
  ☆35Updated 10 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆45Updated 3 weeks ago
• docking-org / pydock3
  Python package wrapping the DOCK Fortran program and providing several tools built on top of it.
  ☆11Updated 5 months ago
• BIMSBbioinfo / CompassDock
  Official Implementation of CompassDock
  ☆14Updated last month
• sarisabban / RosettaAbinitio
  A bash script for an automated Rosetta Abinitio folding simulation on an HPC
  ☆11Updated 4 years ago