Alternatives and similar repositories for af2complex

Users that are interested in af2complex are comparing it to the libraries listed below

• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆111Updated last year
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆140Updated 2 weeks ago
• gjoni / trDesign
  trRosetta for protein design
  ☆179Updated 4 years ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆199Updated last year
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆159Updated 2 years ago
• jertubiana / ScanNet
  ☆125Updated last year
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆124Updated 3 years ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆150Updated last year
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆277Updated 3 months ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆137Updated 3 weeks ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆155Updated 2 months ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆133Updated 3 months ago
• varun-shanker / structural-evolution
  ☆105Updated 10 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆156Updated last year
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆319Updated last month
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆152Updated last year
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆152Updated last week
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆131Updated last month
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆242Updated 4 months ago
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆139Updated last year
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆114Updated 3 years ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆258Updated 2 years ago
• Zuricho / ParallelFold
  Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…
  ☆168Updated last year
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆149Updated 7 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆110Updated 2 years ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆116Updated last week
• twopin / CAMP
  predicting peptide-protein interactions
  ☆130Updated last year
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆212Updated 11 months ago
• uw-ipd / RoseTTAFold2
  ☆192Updated 3 weeks ago