☆33Aug 28, 2025Updated 11 months ago
Alternatives and similar repositories for mutation-catalogue-2023
Users that are interested in mutation-catalogue-2023 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumin…☆48Sep 8, 2025Updated 10 months ago
- Mycobacterium tuberculosis next generation sequence analysis☆25Oct 11, 2019Updated 6 years ago
- Profiling NTM WGS data☆18Jun 20, 2026Updated last month
- Antibiotic resistance prediction in minutes☆119Mar 27, 2026Updated 4 months ago
- Official place for proposals and details around monkeypox virus lineage designations☆23Jul 7, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data☆136Jul 19, 2026Updated last week
- CRyPTIC data processing pipelines☆35Jul 18, 2024Updated 2 years ago
- Code for the WOrld Health Organization's Global tuberculosis report 2024☆13Nov 28, 2024Updated last year
- Standard database for the TBProfiler tool☆30Jun 23, 2026Updated last month
- Visualize microbial evolution at the SNP level!☆16Aug 12, 2025Updated 11 months ago
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated last year
- Local Lineage and Monophyly Assessment☆16Aug 5, 2021Updated 4 years ago
- Primalscheme3. Generation of highly multiplex primerschemes☆26Dec 4, 2025Updated 7 months ago
- CFSAN Shigella Typing Pipeline☆15Jun 11, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Rapidly extract reads from FASTX files based on taxonomic classification via Kraken2.☆15Jun 17, 2026Updated last month
- Reproducible workflow for SARS-CoV-2 recombinant sequence detection.☆18May 15, 2023Updated 3 years ago
- SISTR (Salmonella In Silico Typing Resource) command-line tool☆37Apr 24, 2025Updated last year
- (Experimental) Yet Another bioinformatics workflow engine https://traitome.github.io/oxo-flow/documentation/☆15Jul 22, 2026Updated last week
- software to identify primers that can distinguish genomes☆20Jan 23, 2026Updated 6 months ago
- Scripts and reference files to type Group A Streptococcus☆11Apr 1, 2026Updated 3 months ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jun 13, 2026Updated last month
- Drug Resistance Prediction with Reference Graphs☆21Oct 23, 2025Updated 9 months ago
- Tools for finding mobile element insertions from single-end datasets☆24Dec 14, 2019Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Local alignment search with k-bounded matching statistics.☆24Aug 19, 2025Updated 11 months ago
- Repositorio de apuntes y código del curso Introducción a la bioinformática e investigación reproducible para análisis genéticos del semes…☆13Jun 1, 2017Updated 9 years ago
- Minimum Bait Cover Toolkit Syotti.☆15Jan 22, 2025Updated last year
- ☆144Updated this week
- Introdução à Bioestatística para estudos Desenhos Experimentais em biologia usando Python (2026)☆17Feb 13, 2026Updated 5 months ago
- Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial propertie…☆112Jul 9, 2026Updated 2 weeks ago
- ☆23Apr 2, 2026Updated 3 months ago
- Hierarchical Unique Bait Design for simultaneous and specific capture of known and novel targets☆18Sep 19, 2023Updated 2 years ago
- mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.☆20Feb 26, 2026Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Chimera: A Versatile Metagenomic Classification Tool☆21Updated this week
- emm Automatic Isolate Labeller☆15Mar 25, 2025Updated last year
- Curso de Genómica Computacional impartido en la Facultad de Ciencias, UNAM.☆13Nov 13, 2021Updated 4 years ago
- A Python package to update the MLST database for the mlst tool.☆29Jul 22, 2026Updated last week
- ⚡️🧬 FastMLST: A multi-core tool for multilocus sequence typing of draft genome assemblies☆26Jul 10, 2026Updated 2 weeks ago
- hecatomb is a virome analysis pipeline for analysis of Illumina sequence data☆61Sep 23, 2025Updated 10 months ago
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆380Updated this week