santiago1234 / iCodon
iCodon customizes gene expression based on the codon composition
☆15Updated last year
Alternatives and similar repositories for iCodon
Users that are interested in iCodon are comparing it to the libraries listed below
Sorting:
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated last month
- Modelling insertion efficiency for Prime Insertion Experiments☆13Updated last year
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- off-targeting assessment of Cas9 gRNAs☆13Updated 4 years ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 2 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 3 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 5 years ago
- ☆65Updated 2 months ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆27Updated 6 years ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆31Updated last month
- an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression☆10Updated last year
- Deep learning embedding for nucleotide sequences☆18Updated last month
- Pipeline for generating reference and perturbed sequences for input into predictive models.☆11Updated 6 months ago
- HLA-II ligand predictor.☆43Updated 2 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆20Updated 2 years ago
- Analysis of antibody NGS data☆12Updated 3 years ago
- Associated code for EvoWeaver publication☆12Updated this week
- Tool package to perform in-silico CRISPR analysis and assessment☆25Updated last year
- HLA-I ligand predictor☆39Updated 4 months ago
- ☆10Updated 2 years ago
- Species-aware DNA language models capture regulatory elements and their evolution☆18Updated last year
- Protein Sequence Annotation with Language Models☆20Updated 6 months ago
- ☆28Updated 3 months ago
- Saluki, a method to predict mRNA half-lives from sequence☆24Updated 2 years ago
- Multi-class signal peptide prediction and structure decoding model.☆84Updated 3 months ago
- Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.☆14Updated this week
- Fast and flexible ORF finder☆69Updated 3 years ago
- PRedictor of IMmunogenic Epitopes☆20Updated last year
- Predicting gene expression levels from genomic sequences☆53Updated 4 years ago