EvaYiwenWang / PLSDAbatchLinks
Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.
☆13Updated last year
Alternatives and similar repositories for PLSDAbatch
Users that are interested in PLSDAbatch are comparing it to the libraries listed below
Sorting:
- A shiny package for microbiome functional enrichment analysis☆36Updated 6 months ago
- Professional Comprehensive Omics Data Analysis☆23Updated 4 months ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- Batch effects removal for microbiome data via conditional quantile regression☆31Updated 3 years ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆16Updated 3 months ago
- ☆12Updated last year
- Repository of common bioinformatics scripts☆39Updated 4 years ago
- MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis☆17Updated 11 months ago
- A microbial profiling framework for metagenomic analysis☆24Updated 5 years ago
- This is the supplementary code for CRC-multi-kingdom☆17Updated 3 years ago
- Metagenomics Taxonomic Reads Assembly Single-Species☆16Updated 2 years ago
- ☆19Updated last year
- Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat☆47Updated last month
- gutSMASH☆55Updated 3 weeks ago
- ☆13Updated 10 months ago
- MGKit: Metagenomics Framework☆16Updated 2 years ago
- Scripts for stat and plot figures in rice microbiome paper☆30Updated last year
- ☆15Updated 4 years ago
- ☆24Updated 5 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated 2 years ago
- tspex: tissue-specificity calculator☆34Updated 2 years ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆53Updated 4 months ago
- ☆32Updated 2 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆33Updated 3 years ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆41Updated 5 years ago
- A general metagenomics data mining system focus on robust microbiome research☆58Updated last year
- R package for downstream Microbiome analysis☆30Updated 10 months ago
- A catalogue of available long read sequencing data analysis tools☆80Updated last month
- an R/Shiny application for interactive creation of Circos plot☆49Updated 2 years ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆59Updated 4 months ago