C3BI-pasteur-fr / ngphylogeny-djangoLinks
☆28Updated 2 years ago
Alternatives and similar repositories for ngphylogeny-django
Users that are interested in ngphylogeny-django are comparing it to the libraries listed below
Sorting:
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆84Updated 7 years ago
- MEGAN Community Edition☆72Updated last year
- Annotate DNA sequences for Gene Ontology terms☆42Updated last month
- Antibiotic resistance prediction in minutes☆112Updated 10 months ago
- AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated 2 weeks ago
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56Updated 5 years ago
- Bioinformatics Tools☆90Updated 2 weeks ago
- Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data☆117Updated 2 years ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆103Updated 2 months ago
- Code for design of diagnostic PCR primers, and metabarcoding markers.☆62Updated last year
- Automatically exported from code.google.com/p/prottest3☆38Updated 7 years ago
- Python programs for processing GFF3 files☆101Updated last year
- web documentation for Trinotate☆48Updated 2 years ago
- A catalogue of available long read sequencing data analysis tools☆79Updated 3 weeks ago
- ☆35Updated 2 years ago
- Assembly and intrahost/low-frequency variant calling for viral samples☆143Updated last week
- Snakemake workflow for metagenomic classification with Kraken2☆66Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 5 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customi…☆58Updated last year
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆120Updated 3 weeks ago
- ShortStack: Comprehensive annotation and quantification of small RNA genes☆94Updated 4 months ago
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆108Updated last week
- My collection of light bioinformatics analysis pipelines for specific tasks☆76Updated last year
- (Meta-)genome screening for functional and natural product gene sequences☆92Updated this week
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆106Updated 3 months ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 4 months ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆48Updated last year
- A package for designing compact and comprehensive capture probe sets.☆89Updated last year