an R package to biotype a community
☆14Oct 19, 2021Updated 4 years ago
Alternatives and similar repositories for biotyper
Users that are interested in biotyper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-cell Analysis of Host-Microbiome Interactions☆11Jul 17, 2025Updated last year
- Microbiome Analysis Plotting and Visualization☆12Jul 14, 2026Updated last week
- A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.☆16Aug 16, 2024Updated last year
- A comprehensive command-line based pipeline for the analysis of direct injection FT-ICR mass spectrometry data☆12Jul 13, 2026Updated last week
- repo for cicese metatranscriptomics workshop, nov 2018☆14Jan 22, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Development version of the biom package for R☆24Apr 13, 2021Updated 5 years ago
- METAgenomic LONgitudinal Differential Abundance method☆16Dec 17, 2019Updated 6 years ago
- A shiny package for microbiome functional enrichment analysis☆42Jul 1, 2026Updated 3 weeks ago
- LorMe package for R:Lightening One-code Resolving Microbial Ecology Program☆18Updated this week
- taxonomic classes for Python☆11Aug 30, 2021Updated 4 years ago
- ☆15Oct 7, 2025Updated 9 months ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 5 months ago
- Code and analysis results for the CRC shotgun meta-analysis☆41Sep 28, 2022Updated 3 years ago
- FastViromeExplorer project. Forked from https://code.vt.edu/saima5/FastViromeExplorer☆15Jul 2, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- 90-day Biohacker Challenge: An open-sourced biohacking & quantified-self protocol☆11Sep 10, 2016Updated 9 years ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆16Mar 17, 2023Updated 3 years ago
- ☆13Oct 4, 2022Updated 3 years ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆21Nov 15, 2022Updated 3 years ago
- MutView is a tool to look the reads cover a mutation in bam file, output file is html format, just like a lightweight IGV(Integrative Gen…☆16May 27, 2026Updated last month
- R shiny app for interactive microbiome analysis☆55Jun 5, 2025Updated last year
- Generates a set of plots showing ubiome data over time.☆13May 12, 2019Updated 7 years ago
- Differential analysis of multi-omics data based on the Tweedie distribution☆31May 7, 2026Updated 2 months ago
- SHallow shOtGUN profiler☆52Mar 4, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Companion notebooks for "Dog and human inflammatory bowel disease rely on overlapping yet distinct dysbiosis networks"☆11Jul 13, 2018Updated 8 years ago
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 7 years ago
- The Greek New Testament Study Project☆16Jun 6, 2026Updated last month
- R package for simulating and analyzing temporally autocorrelated populations.☆10Apr 11, 2024Updated 2 years ago
- Data, scripts, and outputs for the npj Biofilms and Microbiomes paper "Analysis of microbial compositions: A review of normalization and …☆11Aug 23, 2020Updated 5 years ago
- New home of the Covid19-NP-Swab NP-swab manufacturing project☆16Jul 24, 2020Updated 5 years ago
- Jupyter Notebook vizualizing 10+ years of my body composition data☆12Jun 27, 2020Updated 6 years ago
- Last copy of the Zeo firmware and SDK available from the developer.myzeo.com before it shut down☆22Jun 11, 2013Updated 13 years ago
- Bioconductor package for management of multi-assay data☆76Apr 29, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Long Text Generation via Adversarial Training with Leaked Information☆11Mar 8, 2022Updated 4 years ago
- A library of web visualizations for mobile health data.☆69Feb 1, 2018Updated 8 years ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆16Jun 26, 2026Updated 3 weeks ago
- ☆10Mar 24, 2025Updated last year
- a collection of R functions for data manipulation, data analysis, and plotting☆14Oct 29, 2020Updated 5 years ago
- ☆16Jun 28, 2013Updated 13 years ago
- Microbiota Analysis in R Easily☆12Jul 14, 2022Updated 4 years ago