DataBiosphere / terra-dockerLinks
☆32Updated last month
Alternatives and similar repositories for terra-docker
Users that are interested in terra-docker are comparing it to the libraries listed below
Sorting:
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Detect somatic variants from tumor and normal WGS/WXS data☆19Updated this week
- GWAS gold standards repository☆38Updated last year
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 2 years ago
- Processing of single cell RNAseq data for the recovery of TCRs in python☆29Updated 4 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆33Updated 6 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- examples to run monorail externally☆17Updated 10 months ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 6 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆45Updated 3 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Data and analysis for the Splatter paper☆29Updated 7 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆49Updated last year
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- Modelling DNA methylation profiles☆23Updated 5 years ago
- A single cell sequencing read simulator.☆33Updated 11 months ago
- Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.☆46Updated 7 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 8 months ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆75Updated this week
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated 2 months ago
- Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.☆25Updated 5 months ago
- ☆55Updated 7 months ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Updated 6 years ago