DataBiosphere / terra-docker
☆28Updated this week
Alternatives and similar repositories for terra-docker:
Users that are interested in terra-docker are comparing it to the libraries listed below
- Detect somatic variants from tumor and normal WGS/WXS data☆16Updated last month
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- Universal RObust Peak Annotator☆15Updated last year
- anor: an annotation and visualization system based on R and Shiny framework☆33Updated 4 years ago
- Bioinformatics for Benched Biologists☆22Updated 4 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆27Updated 3 years ago
- ☆10Updated 5 years ago
- GWAS gold standards repository☆33Updated last year
- An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq☆22Updated 2 months ago
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆27Updated this week
- Using k-mers to call HLA alleles in RNA sequencing data☆22Updated 6 years ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆20Updated 3 years ago
- Paired Genomic Loci Tool Suite☆30Updated 2 years ago
- Statistical power studies for multi-omics experiments.☆31Updated 2 months ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...☆20Updated 8 years ago
- The manuscript repository for the Open Pediatric Brain Tumor Atlas Project☆13Updated last year
- Single cell interactive plotting tools☆23Updated 4 years ago
- Single nucleotide variant (SNV) detection and genotyping algorithm for single-cell DNA sequencing data☆11Updated 4 years ago
- BAGEL software☆27Updated last year
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Updated 2 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆26Updated last year
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated 11 months ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Updated 4 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆45Updated 2 weeks ago
- Analysis for svaseq paper☆19Updated 10 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated last month
- Subclonal Hierarchy Inference from Somatic Mutations☆21Updated last month