CompEpigen / methrixLinks
An R for fast and flexible DNA methylation analysis
☆34Updated 3 weeks ago
Alternatives and similar repositories for methrix
Users that are interested in methrix are comparing it to the libraries listed below
Sorting:
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- R package wrapping bedtools☆44Updated 7 months ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆30Updated 7 months ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 2 weeks ago
- Identify and correct invalid gene symbols☆59Updated 11 months ago
- Suite of tools to conduct methylation data analysis. Methods from this workspace can be used for alignment and quality control analysis f…☆20Updated 4 years ago
- An R interface to the MEME Suite☆52Updated 4 months ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- A tidy interface for coverage analysis☆31Updated 5 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 9 months ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆61Updated 5 months ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆91Updated 7 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- Filtering of PDX samples for mouse derived reads☆28Updated 2 years ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 9 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated 2 weeks ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- R package for genomic feature analysis and visualization☆79Updated 6 months ago
- Flexible Bayesian inference of mutational signatures☆36Updated 2 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆23Updated 2 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago
- ☆29Updated last year