acsbal / Automated-TIL-scoring-QuPath-Classifier-for-Melanoma
QuPath TIL classifier for Melanoma on HE slides
☆9Updated 5 years ago
Related projects: ⓘ
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆47Updated 4 years ago
- ☆13Updated 10 months ago
- ☆25Updated last year
- HCC_Deep_learning☆18Updated 4 years ago
- ☆11Updated 4 years ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆43Updated 6 months ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆74Updated 3 years ago
- ☆30Updated 3 years ago
- Data and code to accompany our Nature publication☆41Updated 2 years ago
- CEll spatial Organization-based graph convolutional network☆18Updated 7 months ago
- ☆28Updated 3 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Updated last year
- Scripts for data processing☆39Updated 3 months ago
- TCGA BLCA tmb prediction by Hongming Xu☆13Updated 3 years ago
- Pan-cancer quantitative histopathology analysis using deep learning☆10Updated 2 years ago
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆20Updated 3 years ago
- ☆32Updated 2 years ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆25Updated 3 months ago
- version 1 scripts for CODA☆31Updated 4 months ago
- A pan-cancer platform for mutation prediction from routine histology☆67Updated 3 years ago
- ☆47Updated last year
- Generating highly accurate pathology reports from gigapixel whole slide images with HistoGPT☆23Updated 2 months ago
- The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell …☆18Updated last year
- Scripts capable of re-creating figures from Van Valen Lab publications☆18Updated 2 years ago
- ☆42Updated 2 years ago
- Code for ST_IGI package☆13Updated 5 months ago
- Train a model to predict gene expression from histology slides.☆91Updated 2 years ago
- ☆20Updated 2 years ago
- IHC-image analysis workflow☆20Updated 6 years ago
- Pan-cancer tils analysis study by Hongming Xu☆13Updated 3 years ago