ACEnglish / adottoLinks
Working space for the GIAB TR benchmarking project
☆23Updated last year
Alternatives and similar repositories for adotto
Users that are interested in adotto are comparing it to the libraries listed below
Sorting:
- Variant annotation and merging pipeline☆41Updated 5 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆38Updated 8 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Structural variant caller☆55Updated 4 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆39Updated last month
- ☆83Updated 10 months ago
- ☆32Updated last year
- MethPhaser: methylation-based haplotype phasing of human genomes☆52Updated 10 months ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆30Updated 2 years ago
- SV genotyping with long reads☆40Updated 2 years ago
- ☆51Updated last year
- A battery of methylation tools for PacBio HiFi reads☆47Updated last month
- A module for improving the insertion sequences of structural variant calls☆33Updated 4 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆47Updated last year
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆53Updated 10 months ago
- ☆36Updated last year
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 6 months ago
- ☆33Updated 3 years ago
- ☆31Updated 6 years ago
- Kmer Analysis of Pileups for Genotyping☆35Updated this week
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- ☆21Updated last week
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆47Updated 4 months ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- ☆51Updated 6 years ago
- ☆44Updated last year
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- Structural variant merging tool☆57Updated last year
- SV calling for diploid assemblies☆30Updated last year