CRISPR discovery pipeline
☆33Nov 2, 2018Updated 8 years ago
Alternatives and similar repositories for CRISPRdisco
Users that are interested in CRISPRdisco are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A CRISPR repeat|spacer analysis tool☆19May 7, 2021Updated 5 years ago
- ☆33Jul 27, 2026Updated 3 months ago
- Mining CRISPRs in Environmental Datasets☆129Feb 10, 2023Updated 3 years ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆112Sep 15, 2026Updated last month
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- CRISPR NGS data analysis and visualization pipeline☆17Jul 26, 2019Updated 7 years ago
- ☆11Nov 21, 2017Updated 8 years ago
- A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences☆106Jul 11, 2023Updated 3 years ago
- ☆12Apr 21, 2016Updated 10 years ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆31Oct 14, 2026Updated 3 weeks ago
- Variant-aware CRISPR off-target nomination☆28Oct 8, 2026Updated 3 weeks ago
- The CRISPR assembler☆36May 13, 2021Updated 5 years ago
- ☆13Mar 12, 2020Updated 6 years ago
- MetaCRAST: reference-guided CRISPR detection in metagenomes☆13Mar 10, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆23Sep 9, 2025Updated last year
- A package for predicting Rho independent terminators in bacterial genomes☆12Dec 14, 2015Updated 10 years ago
- Accurate estimation of off-target editing activity from comparative NGS data☆13Jan 22, 2024Updated 2 years ago
- A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted nex…☆64Oct 26, 2026Updated last week
- Scripts for analyzing PacBio AAV sequences☆15May 3, 2024Updated 2 years ago
- CRISPR Cas9 ontarget prediction software☆34Jul 14, 2026Updated 3 months ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 7 years ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆81Dec 22, 2025Updated 10 months ago
- Data analysis scripts for Datlinger et. al, 2017 (doi:10.1038/nmeth.4177)☆35Feb 22, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Updated this week
- ☆13Sep 17, 2026Updated last month
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆15Jul 23, 2020Updated 6 years ago
- Fast, sensitive and accurate protein remote homology search on GPUs☆15May 6, 2024Updated 2 years ago
- Generalizable Cas9/sgRNA prediction models for multiple Cas9 variants☆11May 4, 2026Updated 6 months ago
- Scripts for processing and predicting CRISPR/Cas9-generated mutations☆29Feb 25, 2023Updated 3 years ago
- ☆16Jun 21, 2022Updated 4 years ago
- Estimate PTM hotspots in protein sequence alignments☆16Feb 6, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated 4 months ago
- ☆76Feb 13, 2023Updated 3 years ago
- ☆34Dec 20, 2023Updated 2 years ago
- SpacePHARER CRISPR Spacer Phage-Host pAiRs findER☆48May 8, 2024Updated 2 years ago
- A python wrapper around SURVIVOR☆20Feb 15, 2024Updated 2 years ago
- Simulate mutations in genomes☆15Jun 15, 2020Updated 6 years ago