Modelling insertion efficiency for Prime Insertion Experiments
☆13Apr 1, 2024Updated 2 years ago
Alternatives and similar repositories for MinsePIE
Users that are interested in MinsePIE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source codes and examples for DeepPrime☆14Dec 17, 2024Updated last year
- CRISPR Indel, base edit analysis☆11Aug 1, 2020Updated 5 years ago
- Python library for genome editing, CRISPR gRNA design and prediction☆21Dec 2, 2025Updated 5 months ago
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- ☆58Sep 27, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Digenome-toolkit ver2.☆16Nov 1, 2021Updated 4 years ago
- Modify existing reference fasta and gff3/gtf files to include a new sequence☆33Feb 27, 2026Updated 2 months ago
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago
- ☆11Feb 2, 2026Updated 3 months ago
- Importing and manipulating Hi-C data in R☆13Apr 29, 2026Updated last week
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated 2 years ago
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆36Nov 17, 2025Updated 5 months ago
- ☆10May 31, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 2 years ago
- Splits fastq files evenly☆24Aug 19, 2020Updated 5 years ago
- for a tutorial at useR2018☆17Jul 9, 2018Updated 7 years ago
- ☆16Apr 18, 2025Updated last year
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 10 months ago
- Utilities for Samtools ( http://samtools.sourceforge.net/ )☆18Sep 26, 2011Updated 14 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- Discover how to build vision transformer from scratch with this comprehensive tutorial. Follow our step-by-step guide to create your own …☆11Apr 14, 2023Updated 3 years ago
- Uniform sampling on various geometric shapes☆10Jul 18, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Whole genome workflows☆13Nov 9, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated 2 years ago
- Importing vg json graphs to Python data structures.☆12Nov 11, 2020Updated 5 years ago
- A python wrapper for the benchling api☆50Sep 11, 2020Updated 5 years ago
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- Seth's Github Pages☆10Sep 27, 2021Updated 4 years ago
- ☆18May 15, 2025Updated 11 months ago
- Dockerised and simplified version of SeqWare-CGP-SomaticCore☆14Mar 5, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Repository detailing updated allowlisting and clonal analysis workflow☆10Feb 1, 2025Updated last year
- Docker image as base for building full MAKER image☆11Feb 28, 2022Updated 4 years ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Feb 27, 2019Updated 7 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆21Aug 2, 2022Updated 3 years ago
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- ☆12Nov 7, 2025Updated 6 months ago
- CHANGE-seq analysis pipeline☆11Dec 18, 2025Updated 4 months ago