julianeweller / MinsePIELinks
Modelling insertion efficiency for Prime Insertion Experiments
☆13Updated last year
Alternatives and similar repositories for MinsePIE
Users that are interested in MinsePIE are comparing it to the libraries listed below
Sorting:
- CRISPR Indel, base edit analysis☆10Updated 5 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆25Updated 2 years ago
- CHANGE-seq analysis pipeline☆11Updated 3 months ago
- ☆18Updated last year
- Comprehensive and scalable differential splicing analyses☆17Updated 5 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 7 months ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Updated 6 months ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- Generate robust DNA barcode sets☆32Updated last year
- Species-aware DNA language models capture regulatory elements and their evolution☆22Updated 2 years ago
- A neural network model to predict splice site usage and splicing-altering mutations☆15Updated last month
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 4 years ago
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆66Updated 2 years ago
- Pipeline for generating reference and perturbed sequences for input into predictive models.☆11Updated 9 months ago
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 6 months ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆54Updated 6 months ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆18Updated last month
- Splits fastq files evenly☆22Updated 5 years ago
- a tool for annotation of immunoglobulin genes in genome assemblies☆11Updated last month
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆30Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆27Updated 7 years ago
- ☆19Updated 9 months ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆70Updated 8 months ago
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Updated last year
- Benchmarking long-read RNA-seq analysis tools☆27Updated 6 months ago
- ☆72Updated 2 months ago
- Bayesian enrichment estimation in R☆11Updated 3 years ago