julianeweller / MinsePIELinks
Modelling insertion efficiency for Prime Insertion Experiments
☆13Updated last year
Alternatives and similar repositories for MinsePIE
Users that are interested in MinsePIE are comparing it to the libraries listed below
Sorting:
- CRISPR Indel, base edit analysis☆11Updated 5 years ago
- Species-aware DNA language models capture regulatory elements and their evolution☆27Updated 2 years ago
- CHANGE-seq analysis pipeline☆11Updated 3 weeks ago
- ☆19Updated last year
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Updated 11 months ago
- Comprehensive and scalable differential splicing analyses☆17Updated 3 weeks ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 11 months ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Updated 7 years ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆19Updated last year
- Benchmarking long-read RNA-seq analysis tools☆27Updated 10 months ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆59Updated 10 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated last month
- ☆18Updated last year
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 4 years ago
- a tool for annotation of immunoglobulin genes in genome assemblies☆13Updated 3 months ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆20Updated 5 months ago
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 11 months ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆16Updated 8 years ago
- ☆19Updated 2 years ago
- Generate robust DNA barcode sets☆33Updated last year
- off-targeting assessment of Cas9 gRNAs☆15Updated 4 years ago
- ☆24Updated 4 months ago
- Scripts for building computational models of gene regulation with tensorflow☆11Updated 5 years ago
- ☆84Updated last month
- Saluki, a method to predict mRNA half-lives from sequence☆27Updated 3 years ago
- Splits fastq files evenly☆23Updated 5 years ago
- read, parse and operate different multiple input file formats with OpenVariant☆14Updated last month
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Updated 11 months ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Updated 5 years ago