Fast and scalable inference for single-cell differential gene expression of multiple patients
☆15Jul 3, 2026Updated last month
Alternatives and similar repositories for devil
Users that are interested in devil are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- High-Performance Sparse Matrix Library☆19Nov 23, 2025Updated 8 months ago
- Slides and Notebooks for scverse 2024☆16Sep 24, 2024Updated last year
- ☆26Jul 15, 2026Updated 3 weeks ago
- parallel differential expression for single-cell perturbation sequencing☆25Jul 14, 2026Updated 3 weeks ago
- Differential spatial enrichment across conditions☆28Jul 14, 2026Updated 3 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆19Jun 3, 2026Updated 2 months ago
- Pareto Task Inference in Python☆23Updated this week
- k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.☆16Updated this week
- Robust and scalable single-cell signature scoring☆28Jul 28, 2026Updated last week
- Single-cell differential expression☆19Apr 23, 2026Updated 3 months ago
- Scalable framework for integrating single-cell omics with genetic data using AnnData.☆20Jul 29, 2026Updated last week
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Aug 3, 2026Updated last week
- AnnData interoperability in R☆194Aug 3, 2026Updated last week
- A mapper for 10x-flex single cell sequencing reads with fixed abstract geometries☆46Jul 8, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆29Sep 4, 2023Updated 2 years ago
- Co-accessibility network from single-cell ATAC-seq data. Python code with AnnData, based on Cicero algorithm.☆35May 23, 2026Updated 2 months ago
- Illico is a python library performing fast and lightweight wilcoxon rank-sum tests for single-cell RNASeq.☆21Jul 30, 2026Updated last week
- ☆35Jun 11, 2026Updated last month
- Configure Vitessce using existing Scverse plotting APIs☆25Updated this week
- HuBMAP Data Portal front end☆13Updated this week
- Interface to the Bioformats Java library☆15Feb 17, 2026Updated 5 months ago
- Conveniently process a dictionary of anndatas☆23Apr 17, 2026Updated 3 months ago
- ☆29Apr 13, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆100Updated this week
- Python bindings for SingleR☆16May 6, 2026Updated 3 months ago
- Fast array utilities☆15Updated this week
- Toolbox for single-cell data analysis on sample level☆25Updated this week
- Spatial and multiomic visualization and analysis library☆28Updated this week
- ☆26Updated this week
- ☆31Updated this week
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆68Updated this week
- ☆17Jan 6, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Convert bioinformatics file formats to Zarr☆47Aug 1, 2026Updated last week
- A deep model infers gene regulation networks from scRNA-seq data.☆12Jul 26, 2026Updated 2 weeks ago
- Flexible, scalable, QTL analyses using generalized linear models implemented in JAX☆19Jun 24, 2026Updated last month
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆72Updated this week
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆17Sep 6, 2025Updated 11 months ago
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆103Nov 24, 2025Updated 8 months ago