Alternatives and similar repositories for NeuralDecomposition

Users that are interested in NeuralDecomposition are comparing it to the libraries listed below

• PythonOT / COOT
  CO-Optimal Transport
  ☆42Updated 4 years ago
• KrishnaswamyLab / TrajectoryNet
  TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics
  ☆123Updated last year
• berenslab / ne-spectrum
  Attraction-Repulsion Spectrum in Neighbor Embeddings
  ☆31Updated 2 years ago
• tjiagoM / gtex-transcriptome-modelling
  Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits
  ☆11Updated 4 years ago
• facebookresearch / PoincareMaps
  The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRN…
  ☆150Updated 4 years ago
• emtiyaz / cvi
  Code for AISTATS 2017 paper on "Conjugate-Computation Variational Inference"
  ☆20Updated 5 years ago
• samuela / oi-vae
  Code for "oi-VAE: Output Interpretable VAEs for Nonlinear Group Factor Analysis"
  ☆26Updated 5 years ago
• danielkunin / Regularized-Linear-Autoencoders
  Loss Landscapes of Regularized Linear Autoencoders
  ☆145Updated 3 years ago
• SheffieldML / GPclust
  Collapsed Variational Bayes
  ☆72Updated 5 years ago
• ParthaEth / Regularized_autoencoders-RAE-
  ☆123Updated 2 years ago
• dmilios / dirichletGPC
  ☆17Updated 6 years ago
• cantinilab / OT-scOmics
  This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…
  ☆42Updated 2 years ago
• kasparmartens / BasisVAE
  PyTorch implementation of BasisVAE: Translation-invariant feature-level clustering with Variational Autoencoders
  ☆42Updated 5 years ago
• rsinghlab / SCOT
  Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data
  ☆75Updated last year
• quadbio / latent-lego
  Latent spaces for single cells
  ☆21Updated last year
• KrishnaswamyLab / DiffusionEMD
  Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings
  ☆38Updated 9 months ago
• fraenkel-lab / mogp
  Mixture of Gaussian Processes Model for Sparse Longitudinal Data
  ☆38Updated 2 years ago
• ManchesterBioinference / BranchedGP
  Branching Gaussian process
  ☆30Updated 2 years ago
• samirchowdhury / HyperCOT
  Code for computing Hypergraph Co-Optimal Transport distances
  ☆16Updated 2 years ago
• jeanfeydy / global-divergences
  MMD, Hausdorff and Sinkhorn divergences scaled up to 1,000,000 samples.
  ☆56Updated 6 years ago
• hchau630 / LSC
  Code for "Disentangling images with Lie group transformations and sparse coding" (2023).
  ☆13Updated 4 years ago
• thibsej / unbalanced_gromov_wasserstein
  Implementation of the Gromov-Wasserstein distance to the setting of Unbalanced Optimal Transport
  ☆45Updated 2 years ago
• trneedham / QuantizedGromovWasserstein
  Scalable framework for comparing metric measure spaces with up to 1M points.
  ☆15Updated 4 years ago
• AmirTag / OT-ICNN
  Learning the optimal transport map via input convex neural neworks
  ☆41Updated 5 years ago
• rajesh-lab / deep_permutation_invariant
  Code accompanying paper "Set Norm and Equivariant Skip Connections: Putting the Deep in Deep Sets."
  ☆28Updated 2 years ago
• ioanabica / DiffVAE
  Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…
  ☆18Updated 5 years ago
• crisbodnar / dgm
  Deep Graph Mapper: Seeing Graphs through the Neural Lens
  ☆58Updated 2 years ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆59Updated 4 years ago
• msesia / deepknockoffs
  Approximate knockoffs and model-free variable selection.
  ☆55Updated 3 years ago
• hhcho / densvis
  Density-preserving data visualization tools den-SNE and densMAP
  ☆114Updated 4 years ago