Boyle-Lab / HMMSTR
☆12Updated 5 months ago
Alternatives and similar repositories for HMMSTR
Users that are interested in HMMSTR are comparing it to the libraries listed below
Sorting:
- Error correction of ONT transcript reads☆58Updated last year
- A Nextflow workflow to generate lift over files for any pair of genomes☆65Updated last month
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 4 years ago
- Working space for the GIAB TR benchmarking project☆21Updated 6 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- ☆27Updated this week
- Tools for processing and analyzing structural variants.☆33Updated 9 years ago
- Set of tools to manipulate and visualize modified base bam files☆55Updated 2 years ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆22Updated 2 years ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆25Updated 2 weeks ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- Variant annotation and merging pipeline☆34Updated last month
- WDL workflows for variant calling and assembly using ONT☆34Updated last week
- ☆39Updated last year
- ☆79Updated 2 months ago
- Structural variant merging tool☆49Updated 8 months ago
- ☆29Updated 4 years ago
- ☆39Updated 8 months ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆32Updated 4 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆55Updated 7 years ago
- An insertion caller for Illumina paired-end WGS data.☆23Updated 9 months ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆49Updated 2 months ago
- ☆21Updated 3 years ago
- Structural variant caller☆54Updated 3 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆100Updated 3 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆42Updated this week
- An easy way to run BioNano genomic analysis☆27Updated 4 years ago
- ☆22Updated 3 years ago