RNA editing detection based on machine learning
☆10Feb 7, 2018Updated 8 years ago
Alternatives and similar repositories for RED-ML
Users that are interested in RED-ML are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for the calculation of RNA-editing index for RNA seq data☆46Jan 8, 2026Updated 3 months ago
- SNP-free RNA editing Identification Toolkit☆49Jan 7, 2025Updated last year
- ☆15Aug 25, 2022Updated 3 years ago
- JAVA framework for accurate SNV assessment☆12Jun 28, 2021Updated 4 years ago
- RES-Scanner is a software package for genome-wide identification and annotation of RNA-editing sites for any species with matched RNA-Seq…☆12Jul 13, 2016Updated 9 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆61Jul 17, 2025Updated 8 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Jul 18, 2025Updated 8 months ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Sep 2, 2025Updated 7 months ago
- scripts for RNA-Seq analysis☆28Feb 20, 2022Updated 4 years ago
- New version of JACUSA -> 2.0☆31Mar 6, 2026Updated last month
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- RNA editing tests☆17Sep 24, 2020Updated 5 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆12Nov 26, 2025Updated 4 months ago
- Single-sequence protein-RNA complex structure prediction with biological language models☆16Sep 23, 2025Updated 6 months ago
- Generalizable Cas9/sgRNA prediction models for multiple Cas9 variants☆10Jan 17, 2026Updated 2 months ago
- CRISPR NGS data analysis and visualization pipeline☆16Jul 26, 2019Updated 6 years ago
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆17Jan 7, 2020Updated 6 years ago
- Texts and assets for the Sociocracy 3.0 Canvas Series☆16May 21, 2024Updated last year
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44May 11, 2017Updated 8 years ago
- Find circRNAs in RNA-seq data.☆15Jul 5, 2016Updated 9 years ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆19Oct 23, 2023Updated 2 years ago
- R interface to megadepth: BigWig and BAM related utilities☆13Mar 31, 2026Updated last week
- Model-based analysis of APA using 3' end-linked reads☆12Aug 14, 2021Updated 4 years ago
- Find CpG islands in genome☆11Mar 27, 2020Updated 6 years ago
- Lightweight Alignment Based Resolution of Alternative Three Prime Ends☆10Jan 26, 2024Updated 2 years ago
- CWL+Singularity implementation of an RNA editing workflow☆40Dec 18, 2020Updated 5 years ago
- RNAsik - more than just a pipeline☆13Feb 6, 2024Updated 2 years ago
- Exploring Isoform-specific interactions☆13Sep 16, 2025Updated 6 months ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Nov 29, 2013Updated 12 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Predicting T Cell Receptor Specificity with Deep Learning☆10Jul 17, 2019Updated 6 years ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Feb 21, 2023Updated 3 years ago
- Transcript assembly tool using multiple change-point inference to improve 3'UTR annotation☆13Dec 2, 2022Updated 3 years ago
- Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics☆14Jan 14, 2022Updated 4 years ago
- Summary of a single or multiple MAF files.☆13Feb 5, 2025Updated last year
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 3 months ago