SNP-free RNA editing Identification Toolkit
☆48Jan 7, 2025Updated last year
Alternatives and similar repositories for SPRINT
Users that are interested in SPRINT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44May 11, 2017Updated 9 years ago
- RNA editing detection based on machine learning☆10Feb 7, 2018Updated 8 years ago
- ☆61Jul 17, 2025Updated 10 months ago
- A tool for the calculation of RNA-editing index for RNA seq data☆46Jan 8, 2026Updated 4 months ago
- ☆15Sep 20, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- RES-Scanner is a software package for genome-wide identification and annotation of RNA-editing sites for any species with matched RNA-Seq…☆12Jul 13, 2016Updated 9 years ago
- Bioinformatics Workflows☆19Nov 26, 2020Updated 5 years ago
- JAVA framework for accurate SNV assessment☆12Jun 28, 2021Updated 4 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆72Jul 18, 2025Updated 10 months ago
- ☆15Aug 25, 2022Updated 3 years ago
- BEER: Batch EffEct Remover for single-cell data☆25Jan 9, 2025Updated last year
- RNA editing tests☆17Sep 24, 2020Updated 5 years ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Sep 2, 2025Updated 8 months ago
- a pipeline to process data of PEM-seq or data similar, which is more comprehensive than superQ☆10Apr 28, 2026Updated 3 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- RNA editing quantification in deep transcriptome data☆16Jul 17, 2025Updated 10 months ago
- ☆16Jan 10, 2022Updated 4 years ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Feb 21, 2023Updated 3 years ago
- 肿瘤突变负荷学习笔记（tumor mutation burden）☆16Dec 10, 2019Updated 6 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Mar 15, 2023Updated 3 years ago
- New version of JACUSA -> 2.0☆31Mar 6, 2026Updated 2 months ago
- ☆13Apr 22, 2021Updated 5 years ago
- FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight☆17Apr 7, 2024Updated 2 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆14May 16, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Detection and couting alternative TSS in single cells☆17Apr 21, 2024Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 4 years ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 4 months ago
- ☆20Jul 6, 2021Updated 4 years ago
- alternative splicing analysis pipeline☆20Apr 9, 2021Updated 5 years ago
- ☆11Feb 20, 2024Updated 2 years ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆13Apr 5, 2026Updated last month
- INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation dataset…☆11Dec 12, 2022Updated 3 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Aug 9, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Imperial College London / Graduate School / Data Science / Data Processing with R☆12Nov 30, 2023Updated 2 years ago
- Imperial College London / Graduate School / Data Science / Introduction to R☆12Jan 15, 2024Updated 2 years ago
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 2 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago