Single-sequence protein-RNA complex structure prediction with biological language models
☆16Sep 23, 2025Updated 8 months ago
Alternatives and similar repositories for ProRNA3D-single
Users that are interested in ProRNA3D-single are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Feb 7, 2023Updated 3 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge☆46Oct 17, 2024Updated last year
- CRISPR NGS data analysis and visualization pipeline☆16Jul 26, 2019Updated 6 years ago
- Generalizable Cas9/sgRNA prediction models for multiple Cas9 variants☆10May 4, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆26Oct 8, 2024Updated last year
- pLM-informed E(3) equivariant deep graph neural networks for protein-nucleic acid binding site prediction☆26Apr 24, 2024Updated 2 years ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆10Updated this week
- RNA editing detection based on machine learning☆10Feb 7, 2018Updated 8 years ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆83Aug 11, 2024Updated last year
- ☆12May 3, 2025Updated last year
- ☆13May 26, 2022Updated 4 years ago
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago
- Some tutorials to help people learn how to program the D-Wave quantum computer.☆13Oct 4, 2018Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- These are the input files for MD simulation in Gromacs 5.0+☆13Apr 10, 2023Updated 3 years ago
- ☆13Mar 16, 2024Updated 2 years ago
- ☆12Aug 28, 2024Updated last year
- ☆10Jul 30, 2024Updated last year
- A deep learning-based predictor of enzyme optimal pH☆10Jun 25, 2025Updated 11 months ago
- ☆16Sep 26, 2025Updated 8 months ago
- Finds the optimal stem configuration of an RNA sequence using the LeapHybridCQMSampler.☆17Oct 31, 2023Updated 2 years ago
- Code for ICML 2021 paper "Regularizing towards Causal Invariance: Linear Models with Proxies" (ICML 2021)☆11Mar 14, 2022Updated 4 years ago
- Reading comprehension based question-answering model for news articles.☆11Jun 22, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆27Apr 2, 2026Updated 2 months ago
- The LoCoHD metric for protein-protein structure comparison☆15Oct 1, 2025Updated 8 months ago
- Machine learning for accurate identification and classification of CRISPR-Cas systems☆23Dec 20, 2024Updated last year
- A bare-metal Python library for building and manipulating the molecular structures of proteins, nucleic acids, and small organic molecule…☆20Updated this week
- ☆13Feb 11, 2021Updated 5 years ago
- 使用PyQt5+FastAPI+SQLAlchemy+Redis+Celery做的一个登录注册页,使用邮箱注册与验证,前后分离,其中:QtLoginRegistrationClient仓库存放 GUI,QtLoginRegistrationServer仓库存放 API☆11Mar 25, 2024Updated 2 years ago
- RNAView identifies base pairs that are formed in nucleic acid structures and classifies them according to the system of Leontis and Westh…☆20Jul 11, 2024Updated last year
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆31Jun 6, 2026Updated last week
- This repository contains a reaction condition selector.☆15Mar 19, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Zooming Memory Based Initialization (ZoMBI) algorithm for discovery of optima within challenging needle-in-a-haystack (extreme data imbal…☆19Feb 14, 2024Updated 2 years ago
- ZDOCK predictions and PDB structures in C++ and Python☆15Jan 1, 2024Updated 2 years ago
- This is for the AI enzyme design course☆19Nov 10, 2025Updated 7 months ago
- ☆19Jan 11, 2024Updated 2 years ago
- Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.☆17Mar 18, 2019Updated 7 years ago
- Code for the paper "Resource-efficient quantum algorithm for protein folding"☆16Jun 23, 2025Updated 11 months ago
- ☆15Aug 13, 2023Updated 2 years ago