☆15Jan 1, 2026Updated 10 months ago
Alternatives and similar repositories for phager
Users that are interested in phager are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool to detect giant viruses aka giant endogenous viral elements (GEVEs) integrated into eukaryotic genomes.☆11Jun 10, 2026Updated 5 months ago
- Git repository containing the code and genomics data published in the article "Predicting phage-bacteria interactions at the strain level…☆13Jan 22, 2026Updated 9 months ago
- FUGAsseM: Function predictor of Uncharacterized Gene products by Assessing high-dimensional community data in Microbiomes☆21Dec 26, 2025Updated 10 months ago
- Pilea: profiling bacterial growth dynamics from metagenomes with sketching☆13Oct 21, 2026Updated 2 weeks ago
- ☆14Dec 19, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 🤝 Tool for mining KEGG pathways completeness data from eggNOG-mapper annotations☆43Aug 30, 2026Updated 2 months ago
- ☆19Jan 12, 2026Updated 9 months ago
- ☆10Jun 9, 2020Updated 6 years ago
- Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). P…☆12Jan 8, 2021Updated 5 years ago
- BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data☆10Jun 13, 2023Updated 3 years ago
- Professional Comprehensive Omics Data Analysis☆32Apr 3, 2026Updated 7 months ago
- vaginal microbiota☆13Jan 21, 2025Updated last year
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆85Sep 8, 2025Updated last year
- Recording personal workflows used in work, study notes, and summaries of various tools and methods.☆11Oct 9, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pairwise machine learning models for phage-host interaction prediction☆23Jun 23, 2024Updated 2 years ago
- Pathogenfinder2☆20Apr 20, 2026Updated 6 months ago
- ☆10Updated this week
- ☆10Feb 25, 2026Updated 8 months ago
- Quantitative Microbiome Profiling☆15Mar 13, 2021Updated 5 years ago
- fRagmentomics is a standardized and user-friendly R package that integrates fragmentomic feature extraction with fragment-level mutation …☆13Nov 3, 2026Updated last week
- Deep learning based prediction of pi-helices in protein sequences☆11Mar 24, 2023Updated 3 years ago
- A deep learning method for the prediction of phage-bacteria interactions based on key genes☆10Dec 16, 2024Updated last year
- CLANS_2 is a Python-based program for clustering sequences in the 2D or 3D space, based on their sequence similarities. CLANS visualizes …☆28Dec 5, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Protein Set Transformer (PST) framework for training protein-language-model-based genome language models. Inference is possible for viral…☆19Jan 26, 2026Updated 9 months ago
- ☆19Jun 25, 2025Updated last year
- ☆20Nov 17, 2022Updated 3 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 11 months ago
- Viral protein family functional prediction using protein language models☆24Jan 6, 2026Updated 10 months ago
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆39Oct 14, 2026Updated 3 weeks ago
- Microbial marker identification from cross-cohort datasets☆15May 15, 2024Updated 2 years ago
- The viral taxonomic assignment pipeline☆48Aug 31, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆42Apr 20, 2026Updated 6 months ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Oct 25, 2021Updated 5 years ago
- Systematic search of all known anti-phage systems.☆188Sep 1, 2026Updated 2 months ago
- ☆18Apr 7, 2026Updated 7 months ago
- Points of Significance: Adding realism to the SIR model for infectious disease epidemics☆13Nov 30, 2021Updated 4 years ago
- 🎆 ✨ Wrapper around fireworks-js to bring fireworks to your Shiny application☆10Mar 8, 2026Updated 8 months ago
- This is the source code for multisamples ARGs profiling using SARG2.0 database☆46Feb 17, 2021Updated 5 years ago
Are these results useful?