PyTorch Implementation of DeepSequence
☆12Aug 13, 2019Updated 7 years ago
Alternatives and similar repositories for DeepSequence-PyTorch
Users that are interested in DeepSequence-PyTorch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A package for making MuE observation models in Edward2.☆13Jun 10, 2021Updated 5 years ago
- Deciphering protein evolution and fitness landscapes with latent space models☆38Nov 2, 2021Updated 4 years ago
- Code and Data for Generative modeling for AAV design☆11Nov 13, 2023Updated 2 years ago
- A generative latent variable model for biological sequence families.☆258Mar 15, 2022Updated 4 years ago
- ☆11Apr 2, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Deep Exploration Networks - Diverse Deep Generative Models for DNA, RNA and Protein Sequences☆31Oct 1, 2021Updated 5 years ago
- pdbTool: An object-oriented Julia tool to parse PDB files and work with them☆17Jan 24, 2021Updated 5 years ago
- A model builder helper for creating graph neural networks akin to the ones described in https://arxiv.org/abs/1806.01261 and https://ie…☆12Apr 18, 2019Updated 7 years ago
- ☆10Dec 28, 2023Updated 2 years ago
- The implementation of "The Kanerva Machine" with Pytorch and Pyro☆12Jun 14, 2018Updated 8 years ago
- Code for the paper LazImpa: Lazy and Impatient neural agents learn to communicate efficiently. Mathieu Rita, Rahma Chaabouni and Emmanuel…☆17Nov 21, 2020Updated 5 years ago
- ☆12Mar 12, 2026Updated 7 months ago
- ☆11Mar 16, 2020Updated 6 years ago
- PlaNet: Learning Latent Dynamics for Planning from Pixels☆10Feb 13, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated 2 years ago
- Code for ICCV 2019 paper "Adaptive Activation Thresholding: Dynamic Routing Type Behavior for Interpretability in Convolutional Neural Ne…☆13Sep 24, 2019Updated 7 years ago
- Interactive visualization of mutational antigenic profiling data☆11Aug 17, 2020Updated 6 years ago
- ☆13May 15, 2024Updated 2 years ago
- HyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NG…☆12Sep 18, 2024Updated 2 years ago
- Polyreactivity Website☆25Jun 26, 2023Updated 3 years ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Feb 7, 2025Updated last year
- This repository is for the paper "A generative nonparametric Bayesian model for whole genomes"☆16Jun 7, 2023Updated 3 years ago
- Inference of homologous recombination in bacteria using whole genome sequences☆10Sep 26, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Analysis tools for PhIP-seq experiments☆13Jan 24, 2022Updated 4 years ago
- ☆13Nov 29, 2017Updated 8 years ago
- Repository for "Learning action-oriented models through active inference"☆12May 11, 2020Updated 6 years ago
- Developing efficient Bayesian phylogenetic inference methods☆12Dec 21, 2019Updated 6 years ago
- Clone from http://people.sc.fsu.edu/~jburkardt/cpp_src/cpp_src.html☆28Feb 3, 2018Updated 8 years ago
- A stable place for guidance source code http://guidance.tau.ac.il/ver2/source.php☆14Oct 10, 2023Updated 3 years ago
- Variational Bayes for discrete undirected models☆11Aug 7, 2017Updated 9 years ago
- Bayesian enrichment estimation in R☆11Nov 15, 2025Updated 11 months ago
- NLP for Proteins - A paper collection☆13Sep 10, 2020Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A Flexible Generative Framework for Graph-based Semi-supervised Learning (NeurIPS 2019)☆16Nov 14, 2021Updated 4 years ago
- Gosling custom component for Streamlit☆13Jun 7, 2024Updated 2 years ago
- Fine-tune AlphaFold 3, AlphaFold 2, Boltz-1, and Boltz-2 on downstream protein tasks. Algorithm notebooks and papers are the supporting l…☆30Oct 9, 2026Updated 2 weeks ago
- A multi-algorithmic framework for phylogenetic inference☆14Oct 11, 2026Updated 2 weeks ago
- ☆19Oct 14, 2026Updated 2 weeks ago
- MicroPheno Project☆12Oct 21, 2022Updated 4 years ago
- Code to calculate regional missense constraint☆13Sep 22, 2026Updated last month